Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07493 ATGGAAGGAAATGATGGGGGTAGATGCAAAGACGATTGTAACAGTTCTTCTGTTGAAATGGATGTCTATGAAAGCAGTTTACAGGAAAATGATGAAACCCATTCTCATGGCCCTCATAATACTTTATCGAGCATATTAACGAGCTCGTCATCTAGCAGATGTTTTGCAGCCCGGAAGTCAGGTAAGCGGTGGAAGCGGCGGCACTATCTACAGCAGAAAGCTCGTCAAGAACGCTTGAACAACAGCAGGAAGTGGAAGGGTGTAGATCAAGACCAGTTGTTGAGCAAGAAGGTTCACAGAATTTCTGAACCAGCAAATCTGGATAGTCTTGCTTCTGAAAATTGCAAAGAAACTGTACCAGACAATGGAAGCCTGGATGACAATAATAAAGCAGCAGTAAATGACAATTTAGTTGATAATGTCAACAATGATGAAGTAATTATTGAAAAGGAAGATTGTGGCACTGCTGAAAGTAAACATGAAAAAGATGCATCTTTATGCTCCTTAAAGAATGGGCAAAGTGAACCGGATGAAGCATCTTGCTCAGATTTTTTGAAATGTATCTCTAAATCAAAGAGGCATTCAGATCGGGATCTTGACAATCCTAAACCATGCAAATCTAGAAAACCAATTGGGGATGATAGCTCATTACTGTCTTGCAAGTACAGTGAAATCTCATTTTGTGGCATTGAGGACCATCTATCAGATGGATTTTATGATGCAGGACGTGATCGGCCATTTATGCCTCTTGAGAGTTATGAGCAAAATCAGTGTCTTGCTTCTCGTGAAGTCATCCTGTTAGACAGAAGGAGAGATGAAGAGTTGGACGCTGTTGTACTCTCTGCTCAGGCATTGGTCTATAATTTGAAGCAGCTAAATGGTTTAAACATTCCTGGGAGCCAGGCTGTGGTTGATAACTTGCAGACAGCATCACTACTTGCACTCTTTGTATCTGATCATTTTGGTGGAAGTGATAGAGGTGCTATTATAGAAAGGACACGGAAATCTGTGTCTGGTTCAAACTATAATAAGCCTTTTGTCTGTACATGCTCGGCTGGAAGCAGCACCAGTACAAGTGCTTCCTCTGAACCAGTTGTAAACACTGTAGAAGATATTGCTCTTTCTAAGATCTCTGAAAAATCTCTTAATTCTATCAAAAGAAGGCGAAATTCAGTTGTAGTTCCAATTGGCTCTGTGCAGTATGGTGTATGTAGACATAGATCTCTTCTTTTTAAGTATTTATGTGATCACATGGAGCCACCTATACCTTGTGAGCTTGTTAGGGGTTACCTGGATTTTTTACCACATGCCTGGAATATCATTCTGATAAAGAGGGGTGCTACATGGGTTCGAATGCTTGTTGATGCTTGCCGACCTCATGATATAAGAGAAGAGAGAGATCCTGAATACTCCTGCAGGTACATACCCCTTAGTCGGCCCAAAATCCCTCCTCCATCTAGTAGTCATATTGGTCCTGATTATTCTTTTCCATCTCTCTCTACATGTGATGAACTTGAGAAAAAAGCTGTGACTACTTTAGTTCGTTGCAAATTTGGATCAGTTGAGGCTGCAGCAAAGGTGCGTACTTTGGAAGTGCAGGAGAGTTCAGCAGATAAAATTAAAAATTTTGAATATAATTGTTTGGGAGAAATTAGAATTCTTGGTGCTTTAAAACACCCCTGCATAGTGGAAATGTATGGACACCGAATATCATGTGAATGGACCATCTCAGCTGATGGTAAATCAGAGCATCGTGTATTAAGATCTGCCATTTTTATGGAATACGTTGAAGGTGGCTCCTTAAAAAGGTATCTAGAGAAGCTGTCAGGAGCTGGCGAAAAGCATGTTCCTATGGAGTTGGCTTTGTATATTGCCAAAGATGTCTCATGTGCTTTGTTGGAGCTGCACTCGAAACATATAATTCATCGTGACATAAAAAGTGAAAACATTCTATGTGATTTTGATAGGAAGAGAGATGATGGAACTCCCATTGTGAAGCTATGTGATTTTGATAGTGCAGTGCCACTAAGATCACCCTTACATGTATGCTGTATTGCTCATGTGGGAACACCACCTCCTTGTGTGTGTGTTGGAACACCTCGATGGATGGCCCCAGAGGTCATGCGGACTATGTATGAAAAAAACACTTATGGACTGGAAGCTGATATTTGGTCGTTTGGATGTTTACTTTTGGAGATGCTGACGTTGCAAATTCCATATTTTGGAGTACCTGATTCACACATCCATGATAGTCTGCAGATGGGTAAACGACCACAATTAAGTGATGAGCTGGAGACATTAAGTTCAATGAATGAACCCACAATGATTCATTCTGGGGAAGAGACGGAAAAATCAGATTCTGAAATAGGTACTTTGAAGTTCCTTGTTGATTTGTTTCATAGATGTGTGGAAGAAAATCCAAATGAACGACCTACTGCTGAAGAAATCCATGAAATGCTGGTTGGACATACAAAGCACCGACAAGGTCAACAAGATGTTGGTAAGATTTAG 2511 0.4062 MEGNDGGRCKDDCNSSSVEMDVYESSLQENDETHSHGPHNTLSSILTSSSSSRCFAARKSGKRWKRRHYLQQKARQERLNNSRKWKGVDQDQLLSKKVHRISEPANLDSLASENCKETVPDNGSLDDNNKAAVNDNLVDNVNNDEVIIEKEDCGTAESKHEKDASLCSLKNGQSEPDEASCSDFLKCISKSKRHSDRDLDNPKPCKSRKPIGDDSSLLSCKYSEISFCGIEDHLSDGFYDAGRDRPFMPLESYEQNQCLASREVILLDRRRDEELDAVVLSAQALVYNLKQLNGLNIPGSQAVVDNLQTASLLALFVSDHFGGSDRGAIIERTRKSVSGSNYNKPFVCTCSAGSSTSTSASSEPVVNTVEDIALSKISEKSLNSIKRRRNSVVVPIGSVQYGVCRHRSLLFKYLCDHMEPPIPCELVRGYLDFLPHAWNIILIKRGATWVRMLVDACRPHDIREERDPEYSCRYIPLSRPKIPPPSSSHIGPDYSFPSLSTCDELEKKAVTTLVRCKFGSVEAAAKVRTLEVQESSADKIKNFEYNCLGEIRILGALKHPCIVEMYGHRISCEWTISADGKSEHRVLRSAIFMEYVEGGSLKRYLEKLSGAGEKHVPMELALYIAKDVSCALLELHSKHIIHRDIKSENILCDFDRKRDDGTPIVKLCDFDSAVPLRSPLHVCCIAHVGTPPPCVCVGTPRWMAPEVMRTMYEKNTYGLEADIWSFGCLLLEMLTLQIPYFGVPDSHIHDSLQMGKRPQLSDELETLSSMNEPTMIHSGEETEKSDSEIGTLKFLVDLFHRCVEENPNERPTAEEIHEMLVGHTKHRQGQQDVGKI. 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07493 836 ProSiteProfiles Protein kinase domain profile. 507 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07493 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Seca8g07493 836 SUPERFAMILY Protein kinase-like (PK-like) 511 820 IPR011009 -
Seca8g07493 836 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 106 826 - -
Seca8g07493 836 FunFam Leucine-rich repeat protein kinase family protein 545 826 - -
Seca8g07493 836 MobiDBLite consensus disorder prediction 20 46 - -
Seca8g07493 836 Gene3D Transferase(Phosphotransferase) domain 1 501 834 - -
Seca8g07493 836 SMART serkin_6 503 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07493 836 Pfam Protein kinase domain 534 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07493 836 Pfam Ethylene-responsive protein kinase Le-CTR1 374 455 - -
Seca8g07493 836 SUPERFAMILY Cysteine proteinases 400 458 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07493 Seca-Chr8 172076148 172081193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07493 515 818 MAP Kinase Kinase Kinase AT5G66850 28.616 2.59e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Seca8g07493 Pkinase 7.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07493 - - gmx:100819959 1327.77