Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07485 GTTGGCTCTTTTAGCAGATGCCTTAGGTACCCCATTTTTGCTGCTCAGTATATCCTAAAGCAGGAGAAGATCTCAATTAGTTGGTATATTAGTGTCTATTCCTTCCTTCTAGTATCCACTTCTACAACGGCTCCTCTGTTTTTGTTATGCTTTGCTTCCCACGGAATGGATACTCAGGAAGTCGCGGGAAGACAGAAAACTTCTAGGAGAGTTGCAAGTGTTGTGGGCATCAATGGGTTTCACTGCAACCTGAAACCTGAAGATAAGTTGAGACATGTAAAGGATATCTCAAGAGATATGGGGGGAGGCTTAATTATGGTTGGTGAAGGTATTAATGATGCTCCAGCACTTGCAGCTGCAACTGTTGGGATTGTTCTTGCTCATCGTGCTAGTGCAACTGCCATAGCTGTTGCTGATGTGTTGTTGCTTCGAGAAAATATTTCTGCAGTGCCATTTTGTATTGCCAAATCATGCCAAACAACCTCACTGATTAAGCAAAATGTGGCTTTGGCATTGCCATGCATTGTCATGGCTTCCTTTCCGTCTGTGTTTGGGATTTCTGCCATTGTGGTTGACGGTATGAAATTCATTTTAATTTGA 600 0.4267 VGSFSRCLRYPIFAAQYILKQEKISISWYISVYSFLLVSTSTTAPLFLLCFASHGMDTQEVAGRQKTSRRVASVVGINGFHCNLKPEDKLRHVKDISRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSCQTTSLIKQNVALALPCIVMASFPSVFGISAIVVDGMKFILI. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07485 199 PRINTS P-type cation-transporting ATPase superfamily signature 107 126 - -
Seca8g07485 199 PRINTS P-type cation-transporting ATPase superfamily signature 131 143 - -
Seca8g07485 199 Gene3D - 55 176 IPR023214 -
Seca8g07485 199 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 65 186 - -
Seca8g07485 199 SUPERFAMILY HAD-like 63 189 IPR036412 -
Seca8g07485 199 NCBIfam HAD-IC family P-type ATPase 68 189 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07485 Seca-Chr8 171949172 171952276 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07485 67 185 Primary Pumps ATPases AT4G37270 75.630 3.03e-54 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07485 K01534 - gmx:547503 207.994