Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07455 ATGGGTAAGGAATGGTATTGGAGTGGAAGGTCCTCCAAGAGAGGTGGAAGAGCTGAAACAGAAATCCCTTCTGGTTGTATGTGTGCAGTCTTTCAGGCCTTTGATTTTCATCCATTTCACTTTTCCATGAACCACCAACAACCCTCTTTCAAATCTGCCTCTCGCATTCCACTCTCAGATGACCACACTGTCCCAAAAGGAGCTGAAGCACCTAGGAATAGCTTGGAATCAGAAGATGGTACAGTGTCATCCATCTCAAAAGAGGAAAATTTTAAAATCCCAAAGAACATTAGAATCAAGACAAGAGCAGGAAGTTTGAGTGATTTTTCTTCAGAAATCAGCAGCTCTCCAGGGACCAAAACACCAACATTGGTTGCAAGATTGATGGGTCTTGATCTTCTTCCTGATACACATTCCTCCTCTTCCTCTTCTTCTTCATGTCTTTCTACTCCAAAACGACAAGGCCATCCACATCAGCACCACAATAAGCAAAGGCAACACATCCAAATAATGAAACACAGACACAGCATAGACAGTAGTGACAATGTGGCTACTATTCGCTCTTTGCCTGAGACTCCTAGAATGTCCTCTGCAAGAAGATCAGATGTTGAGCATAGACTATCTCTCCAAATCAACAAGGAGAATATGGGTCTTGGTGAGGATTTAGAGGCTCCTCGGTTTTCATTTTCAAAGAGGAAATATGATGAGAACAATAGCAGAAGTCCAAGCCACTATGCCAGGCAAATTGTTAAACAGGTTAAAGAAAGTGTAAGCAGGAAAGTTGGGCTTGACATCACCAACACAGTCAAAAACAGAGAGCATGAAAGAGAAGATTTTGTTGGCCAATTCAAATTCAAGAAACCTCCTAAGAAATCAGTAGATGAGTCCAGCACAGGAAAGCACTCAAACTCATCTTACTCCCCAAGACTCAGCAGATTCATGGATACCAACCATAAACAAAGCACAAAACCATCACCAATTACTCCAAAAGACCAAAACACACGCCCGCTACTAAAACCATCATCACCCCCACCTGTAGTCAACATTGAAGCACAGCTTTCAAGAGTTTCAACAAAGTCAAAGCCTCAAGTATTGTCCGAGAAGGAGTTGCAGCAGAACCAAAAATCAGTCCCAAAATACCAGAAAACCACCAATGGAAAGTTGAGTTCACGGCTCAACAAGCCTCCACAGACCTCAATCAGGAACAAGCAAGAAGAGCCATTTATTATTCGACCACCATCAACCACTAGAGCTAATGACACCAAAACCAAAAGCAAGAGAACTCATCCACTTTCAAGCAATCTTCTCAGTCCAAATCTTCTCCATGTCAAGACAGACCCTTCTCCTCCAGCAACCAAAATTCCTCAAAAACAGGTAACTGATCATGAGACCCGAGAAGCGAAACACAGCACACAGTTATTTAGTTGTTCGCGCCAGAAGTACAAACAAGAAGTGACGCACACACTCGCCACTCGAGGAACCAACGATGAAGACAAATCTAACGGTGCGATCACCGCCACCACCGGAGCTGACGATGAAGGACCAGAATATCAGTACATCACAACCATTCTAAGCCGTACTGGGGTACTACACAATGCCACAGTACCCCACTTTCAATTTCAATGGTTCTCTTCTACCCATCCATTGGACCCTTCACTTTTTCACCGTCTCGAATTCTACCCATCATCCAATTCCTTTGCTTTTTCCCCGGACAATGATAAAGATAGAAACTTTATGAAGAAAAACCATCTGGGTCCACGTTGCAACCGCAGATTACTGTTTGATCTGGTCGATGAGGTGCTGTCGGAGATTCTGGTTAGGCCAAGGTGTTACCGGGGGTGGTTGTTGGAGACAGTGTGGAAGAGGGTTCGGAGTTTCCCACGTGCGAAATGCGAGTTTTTGGAGGACATTGATGGGTTGATAGAGATGGAGGACATGCAGGGGAAGATGAAGAAAGAAGAAGGAGAAAGGTTGGTGGCGGAGATCGAAGGGAAGATAATGGAGACGTTGGTGCATGAAACGATAACCGTTATGGTTGGTGGCGTGGAAGGGTGTGTCCGTACATAG 2067 0.4436 MGKEWYWSGRSSKRGGRAETEIPSGCMCAVFQAFDFHPFHFSMNHQQPSFKSASRIPLSDDHTVPKGAEAPRNSLESEDGTVSSISKEENFKIPKNIRIKTRAGSLSDFSSEISSSPGTKTPTLVARLMGLDLLPDTHSSSSSSSSCLSTPKRQGHPHQHHNKQRQHIQIMKHRHSIDSSDNVATIRSLPETPRMSSARRSDVEHRLSLQINKENMGLGEDLEAPRFSFSKRKYDENNSRSPSHYARQIVKQVKESVSRKVGLDITNTVKNREHEREDFVGQFKFKKPPKKSVDESSTGKHSNSSYSPRLSRFMDTNHKQSTKPSPITPKDQNTRPLLKPSSPPPVVNIEAQLSRVSTKSKPQVLSEKELQQNQKSVPKYQKTTNGKLSSRLNKPPQTSIRNKQEEPFIIRPPSTTRANDTKTKSKRTHPLSSNLLSPNLLHVKTDPSPPATKIPQKQVTDHETREAKHSTQLFSCSRQKYKQEVTHTLATRGTNDEDKSNGAITATTGADDEGPEYQYITTILSRTGVLHNATVPHFQFQWFSSTHPLDPSLFHRLEFYPSSNSFAFSPDNDKDRNFMKKNHLGPRCNRRLLFDLVDEVLSEILVRPRCYRGWLLETVWKRVRSFPRAKCEFLEDIDGLIEMEDMQGKMKKEEGERLVAEIEGKIMETLVHETITVMVGGVEGCVRT. 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07455 688 MobiDBLite consensus disorder prediction 347 404 - -
Seca8g07455 688 MobiDBLite consensus disorder prediction 279 297 - -
Seca8g07455 688 MobiDBLite consensus disorder prediction 298 337 - -
Seca8g07455 688 MobiDBLite consensus disorder prediction 135 153 - -
Seca8g07455 688 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 681 - -
Seca8g07455 688 Pfam Domain of unknown function (DUF4378) 516 673 IPR025486 -
Seca8g07455 688 Pfam DUF761-associated sequence motif 110 140 IPR032795 -
Seca8g07455 688 MobiDBLite consensus disorder prediction 279 471 - -
Seca8g07455 688 MobiDBLite consensus disorder prediction 135 166 - -
Seca8g07455 688 MobiDBLite consensus disorder prediction 52 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07455 Seca-Chr8 171591988 171595003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07455 97 676 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 33.909 1.71e-52 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07455 - - gmx:102659931 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07455 8 171591988 171595003 Seca8g07455 8 171591988 171595003 ECH
Seca10g04169 10 93200536 93204163 Seca8g07455 8 171591988 171595003 PCT