Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07453 ATGGCTCCTCTGCCTTCAAAAACCATCTTTCCAATCATTTTCCTCCTCTTCACTATATTCTCATTATCCAAAGCTGAACTTGATGCTCATTACTATGACCAAACATGTACACAGTTGGAAAAAATAATTTCAGAGACAGTTCTCAATGCTTCTATGCATGACCCAAAAGTCCCAGCTCGTATTTTGAGGATGTTCTTCCATGACTGTTTCATAAGGGGATGTGATGCATCAATATTGCTGGACTCAACTTCCACTAACCAAGCAGAGAAAGATGGCCCTCCTAATAACTCAGTTCGATCGTTCTATGTGATTGATGATGCCAAAAAAAAGCTTGAGTTGGCTTGTCCACGCACTGTTTCTTGTGCTGATATAATTGCTATTTCAGCTAGAGATGTGGTAGCCATGTCTGGAGGACCATATTGGAATGTACTGAAAGGACGGAAAGATGGAAGGGTGTCAAAGGCATCAGATACCATCAACTTACCCTCTCCAACCTTCAATGTGAGCCAACTCATTCAGAGCTTTGCTAAGAGAGGGTTGGGAGTTAAAGATATGGTAGCTTTATCTGGAGGTCACACTCTAGGCTTTTCACATTGTTCTTCCTTTGAAGCTCGTCTTCATAATTTTAGTTCATTCCATGACATTGATCCAAGCATGAACACTGAGTTTGCACTAGACCTTAGAAAGAAATGTCCAAGACCAAACAACGATGGGGACGTAGGACAATTCTTGGACTCAACAGCATCAGTGTTTGATAATGACTATTACAAACAACTGTTGGCAGGAAAAGGTGTGTTTAATTCGGATCAATCACTTGTTGGTGATTACAGAACTAGATGGATTGTTGAAGCATTCGCGAGGGACCAGAGTTTGTTCTTCAAAGAGTTTGCAACTTCAATGTTGAAGCTAGGAAATGTAATAGGTTCGGAAAATGGAGAAGTGAGACTTAATTGCAGGATTGTGAGAAAAATCTTGTCAATCATTTTCCTCCTCTTGACAATATTTTCAGTATCCAAAGCTGAACTTGATGCTCATTACTATGACCAAACATGTCCACAATTGGAAAAAATAATTTCAGAGACGGTTTTCAATGCTTCTAAGCATGACCCTAAAGTCCCAGCTCGTATCTTGAGGATGTTCTTCCATGACTGTTTCATAAGGGGATGTGATGCATCAATATTGTTGGACTCAACTGCCACTAACCAAGCAGAGAAAGACGGCCCTCCTAATATCTCAGTTCGATCATTCTACGTGATTGATGATGCCAAAGCAAAGCTTGAGTTGGCTTGTCCACACACTGTTTCTTGTGCTGATATAATTGCTATTTCAGCTAGAGATGTGGTAGCCATGTCTGGAGGACCATATTGGAATGTACTAAAAGGACGGAAAGATGGAAGGGTGTCAAAGGCATCTGATACCATCAACTTACCCGCTCCAACCTTCAATGTGAGCCAACTTATTCAGAGCTTTGCTAAGAGAGGGTTGGGAGTTAAAGATATGGTAGCTTTATCTGGAGGTCACACTCTAGGCTTTTCACATTGTTCTTCCTTTGAAGCTCGTCTTCATAATTTTAGTTCATTCCATGACATTGATCCAAGCATGAACACTGAGTTTGCACTAGACCTTAGAAAGAAATGTCCAAGACCAAACAACAATGGTGACGCAGGACAATTCTTGGACTCAACAGCATCAGTGTTTGATAATGACTATTACAAACAACTGTTGACAGGAAAAGGTGTGTTTAACTCGGATCAATCACTTGTTGGTGATTACAGAACTAGGTGGATTGTTGAAGCATTCGCGAGGGATCAGAGTTTGTTCTTCAAAGAGTTTGCAACTTCAATGTTGAAGCTAGGAAATGTAAGAGGCTCTGAAAATGGAGAAGTGAGACTCAATTGCAGGATTGTGAATTGA 1914 0.406 MAPLPSKTIFPIIFLLFTIFSLSKAELDAHYYDQTCTQLEKIISETVLNASMHDPKVPARILRMFFHDCFIRGCDASILLDSTSTNQAEKDGPPNNSVRSFYVIDDAKKKLELACPRTVSCADIIAISARDVVAMSGGPYWNVLKGRKDGRVSKASDTINLPSPTFNVSQLIQSFAKRGLGVKDMVALSGGHTLGFSHCSSFEARLHNFSSFHDIDPSMNTEFALDLRKKCPRPNNDGDVGQFLDSTASVFDNDYYKQLLAGKGVFNSDQSLVGDYRTRWIVEAFARDQSLFFKEFATSMLKLGNVIGSENGEVRLNCRIVRKILSIIFLLLTIFSVSKAELDAHYYDQTCPQLEKIISETVFNASKHDPKVPARILRMFFHDCFIRGCDASILLDSTATNQAEKDGPPNISVRSFYVIDDAKAKLELACPHTVSCADIIAISARDVVAMSGGPYWNVLKGRKDGRVSKASDTINLPAPTFNVSQLIQSFAKRGLGVKDMVALSGGHTLGFSHCSSFEARLHNFSSFHDIDPSMNTEFALDLRKKCPRPNNNGDAGQFLDSTASVFDNDYYKQLLTGKGVFNSDQSLVGDYRTRWIVEAFARDQSLFFKEFATSMLKLGNVRGSENGEVRLNCRIVN. 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07453 637 CDD secretory_peroxidase 26 321 IPR033905 GO:0004601|GO:0042744
Seca8g07453 637 ProSiteProfiles Plant heme peroxidase family profile. 26 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 Gene3D - 345 637 - -
Seca8g07453 637 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Seca8g07453 637 ProSitePatterns Peroxidases proximal heme-ligand signature. 499 509 IPR019793 -
Seca8g07453 637 Pfam Peroxidase 50 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 Pfam Peroxidase 360 603 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 PANTHER PEROXIDASE 25-RELATED 331 623 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 FunFam Peroxidase 162 303 - -
Seca8g07453 637 ProSiteProfiles Plant heme peroxidase family profile. 341 637 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 SUPERFAMILY Heme-dependent peroxidases 27 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 FunFam Peroxidase 345 484 - -
Seca8g07453 637 FunFam Peroxidase 30 170 - -
Seca8g07453 637 FunFam Peroxidase 477 618 - -
Seca8g07453 637 Gene3D Peroxidase, domain 2 477 618 - -
Seca8g07453 637 Gene3D Peroxidase, domain 2 162 303 - -
Seca8g07453 637 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 PRINTS Plant peroxidase signature 375 395 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 PRINTS Plant peroxidase signature 498 510 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 PRINTS Plant peroxidase signature 557 572 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 PRINTS Plant peroxidase signature 351 370 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 PRINTS Plant peroxidase signature 414 427 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 PRINTS Plant peroxidase signature 452 467 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 PRINTS Plant peroxidase signature 613 626 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 PRINTS Plant peroxidase signature 433 443 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 PRINTS Plant peroxidase signature 573 590 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07453 637 Gene3D - 30 321 - -
Seca8g07453 637 CDD secretory_peroxidase 341 636 IPR033905 GO:0004601|GO:0042744
Seca8g07453 637 SUPERFAMILY Heme-dependent peroxidases 342 637 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07453 Seca-Chr8 171570009 171580107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07453 324 637 Peroxidase AT5G51890 73.968 4.44e-173 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07453 K00430 - gmx:100799516 566.229