Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07444 ATGGCTGTTGCCAGGAGCAACAGCAGCAGTGAACCTTCTACATCATACAATTGTTACAAAGTAGCAAGCTTGACTGAAACCATATTAGACACAAAGCAAACTGCTAATTTGAAAGATCGATACATTCTTGGGGAGCAATTGGGTTGGGGACAGTTTGGTGTCATAAAAGCATGCTCTGACAAACTGACAGGAGAGCTTTTGGCCTGCAAATCAATTGCTAAAGATAGGTTGGTTACCTCAGATGATATGCAGAGTGTTAAACTTGAAATTGAGATAATGGCTAAGTTATCTGGGCACCCAAATGTTGTAGATCTCAAGGCAGTTTATGAAGAGGAAGACTTTGTTCATTTGGTGATGGAGCTTTGTGCTGGAGGGGAGCTGTTTCACTTGTTAGAGAAGCATGGGAGGTTTTATGAATCTGAAGCAAGGGTTCTCTTTCGGCATCTCATGCAGATGGTTTTGTATTGTCATGAAAATGGGGTTGTTCATAGAGATTTGAAGCCTGAAAACATTCTCTTAGCAACTAGATCCTCCTCATCTCCAATTAAATTGGCAGACTTTGGGCTTGCAACCTACATCAAGCCTGGACAGAGTTTGCATGGGTTAGTTGGGAGTCCATTTTATATAGCTCCAGAGGTGCTGGCAGGTGCATATAACCAGGCTGCTGATATTTGGAGTGCAGGGGTTATTCTTTACATTCTACTAAGTGGGATGCCTCCATTTTGGGGAAAGACAAAGTCACGGATATTTGAAGCTGTTAAGGCTGCTGATTTGAGGTTCCCTTCTGAACCTTGGGATTACATTTCTGAATCTGCTAAGGATTTAATTAGGGGAATGCTCTGCACAGAACCTTCTCAAAGGCTCACTGCCCAGGATGTTTTGGATCTGAACTTTACCTTTGTAGATCATTGCTGGATGGAAAGCAATCAAACATATCCTGAACTCGGTGGAGAGTGGGATGTTAGTCGCAACTCATTCTCTGCCTCATTTATGTCCAGGAATCAGGACATCAGCTTTGGTGCTGGATCACCTACGTGTGATGCTCAATCACCTACTTTCACATGTAAATCATCATTTTCTTCCATTTTTGTGGAACCAGTGACACCTGGTGGGTTTTCATTTGAGAGCTCAGGTGGTTCCACTGATTTGGAATTTTCTTCTCCTTTTCCCTCCATGCCTAGCTTTGCATTTCTTAGCCCCAGTTCTGTTACTGAGCAAAGGAGTTGTGTGTTAGAGTTCTCAATTAACGCGTCAGAAGTAAATGCAATTGCTGGAGACTCTCGCCTTTGCTTTGGACATGATATTAAAGAAAGGGATCTCAAGCCTGTAGAGGCTAAAAGGGCAGGTGGAACAAATGGCAATAGGGCATTGGGATTCCACAGCAAGAGAAACCGGACAATTGGACTCGGTGAGTGTGAGCAACTTGATCTTGTGGTGACTGAATCAGTGATTCGTTGGTCATCATGCACACAACTTCCAACATCACCAAGATCATCTCTTGTCTGTTGA 1509 0.4321 MAVARSNSSSEPSTSYNCYKVASLTETILDTKQTANLKDRYILGEQLGWGQFGVIKACSDKLTGELLACKSIAKDRLVTSDDMQSVKLEIEIMAKLSGHPNVVDLKAVYEEEDFVHLVMELCAGGELFHLLEKHGRFYESEARVLFRHLMQMVLYCHENGVVHRDLKPENILLATRSSSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADIWSAGVILYILLSGMPPFWGKTKSRIFEAVKAADLRFPSEPWDYISESAKDLIRGMLCTEPSQRLTAQDVLDLNFTFVDHCWMESNQTYPELGGEWDVSRNSFSASFMSRNQDISFGAGSPTCDAQSPTFTCKSSFSSIFVEPVTPGGFSFESSGGSTDLEFSSPFPSMPSFAFLSPSSVTEQRSCVLEFSINASEVNAIAGDSRLCFGHDIKERDLKPVEAKRAGGTNGNRALGFHSKRNRTIGLGECEQLDLVVTESVIRWSSCTQLPTSPRSSLVC. 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07444 502 FunFam Phosphoenolpyruvate carboxylase kinase 128 321 - -
Seca8g07444 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Seca8g07444 502 SUPERFAMILY Protein kinase-like (PK-like) 38 360 IPR011009 -
Seca8g07444 502 Gene3D Transferase(Phosphotransferase) domain 1 128 318 - -
Seca8g07444 502 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Seca8g07444 502 Pfam Protein kinase domain 43 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07444 502 ProSiteProfiles Protein kinase domain profile. 41 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07444 502 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 332 - -
Seca8g07444 502 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Seca8g07444 502 FunFam Calcium-dependent protein kinase 1 43 126 - -
Seca8g07444 502 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07444 502 CDD STKc_CAMK 40 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07444 Seca-Chr8 171447058 171450705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07444 36 315 EF-hand Containing Proteins AT5G19360 48.571 5.86e-93 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca8g07444 Pkinase 2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07444 - - gmx:100776088 785.793