Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07383 ATGGAGTTTCTAGGGCTATTTGGGGTTCTTGTTGCCATCTTGGCAGCACTTTGCCTCTTGTTACTAACATTTTCTTGGTGGGTTATCCCAATCCAAACACATAAGAAGCTTAAAAGATGTGGTTTTGGAGGGCCAACCCCAAGTTTTCCACTTGGAAACATTAAAGAGATGATCAAAAGAGAGAATATCATTAAATTTTCAGTTGTATCCTCAAATCTCTGGCATGATATTCACTCATACGTTTTTCCATACTTTTCTAGCTGGCAGAAATCACATGGTAAGGTGTTTGTGTACTGGCTGGGAACGGAGCCATTTTTGTACATTGGAGAGGCAGAGTTTTTGAAGAAGATGTCAACAGAGGTGATGGCAAAGACATGGGGAAAGCCAAGTGTGTTTAGAAATGATAGAGACCCAATGTTTGGGAGTGGTTTGGTGATGGTTGAAGGAAACGACTGGGTTCGTCACCGCCACATTGTTGCCCTCGCATTCAATCCCATTAACCTCAAGGTGATGGCAAGCAGGATGGTTGAGTCTACGAATCAAATGATAGGAAGATGGACAACCTTAATAAACAAAGGAAACCCCGAAATCGACGTGGAGAGAGAGATTATAGCAACAGCTGGTGAGATAATAGCAAAAACAAGTTTTGGGATGGAAGATGAGAATGCTAGAGAGGTTTTTGACAAATTAAGAGCCTTACAAATGACTCTCTTCAAGACCAATAGGTATGTTGGGGTTCCCTTTGGCAAGTATTTCAATGTGAAGAAAACACTAGAGGCCAAGAAACTTGGGAAAGAAATCGACCAGCTCTTGTCTTCCATCATTGAAGAGCGTAAGAAATCACCCAAAAAGAATTCCCAACAAGATTTATTAGGTTTATTGCTGAAAGATAATTCAGGCAAGACACTAACAACACGAGAAGTGGTCGATGAATGTAAGACTTTCTTTTTTGGCGGTCATGAAACGACAGCACTTGCTATCACATGGACTTTGCTACTCTTAGCTATGCATCAAGATTGGCAAAGCCAGTTGAGGGATGAGATCAAAGAAGTGGTGGGAGACAACGAGCTTGATATCACTATGCTTGCTGGTTTGAAGAAGATGAAGTGTGTGATGAATGAAGTTTTAAGACTATACCCACCAGCACCAAATGTGCAAAGACAAGCAAGGGAAGATATTCAAGTGGATGATTTTACAGTGCCTAATGGAACCAATTTGTGGATTGATGTGGTAGCGATGCACCATGACCCTGAATTATGGGGAAATGATGTGAATGAGTTCAAGCCAGAGAGGTTCATGGATGATGTGAATGGTGGATGCAACCATAAGATGGGGTACTTGCCATTTGGGTTTGGAGGGAGGATGTGTGTTGGTAGGAACTTGACCTTCATGGAGTATAAGATTGTATTAACCTTACTTTTGTCTAGGTTCAGTTTTAAGGTTTCCCCAGGTTACCATCATTCACCATCTATCATGCTCTCCCTAAGGCCCACTCATGGACTTCCACTCATAGTTCAACCACTTTAG 1527 0.4172 MEFLGLFGVLVAILAALCLLLLTFSWWVIPIQTHKKLKRCGFGGPTPSFPLGNIKEMIKRENIIKFSVVSSNLWHDIHSYVFPYFSSWQKSHGKVFVYWLGTEPFLYIGEAEFLKKMSTEVMAKTWGKPSVFRNDRDPMFGSGLVMVEGNDWVRHRHIVALAFNPINLKVMASRMVESTNQMIGRWTTLINKGNPEIDVEREIIATAGEIIAKTSFGMEDENAREVFDKLRALQMTLFKTNRYVGVPFGKYFNVKKTLEAKKLGKEIDQLLSSIIEERKKSPKKNSQQDLLGLLLKDNSGKTLTTREVVDECKTFFFGGHETTALAITWTLLLLAMHQDWQSQLRDEIKEVVGDNELDITMLAGLKKMKCVMNEVLRLYPPAPNVQRQAREDIQVDDFTVPNGTNLWIDVVAMHHDPELWGNDVNEFKPERFMDDVNGGCNHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSRFSFKVSPGYHHSPSIMLSLRPTHGLPLIVQPL. 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07383 508 Pfam Cytochrome P450 79 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07383 508 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 500 - -
Seca8g07383 508 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07383 508 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07383 508 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07383 508 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07383 508 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07383 508 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07383 508 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07383 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Seca8g07383 508 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07383 508 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07383 508 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07383 508 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07383 508 SUPERFAMILY Cytochrome P450 73 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07383 508 Gene3D Cytochrome P450 27 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07383 Seca-Chr8 170711849 170714874 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07383 6 508 Cytochrome P450 AT5G52400 60.236 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07383 - - gmx:100785284 873.233