Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07382 ATGGAGTTTCTAGGGGTTCTTGTTGCATTCTTGGCAGCATTTTGCTTCTTGTTGCTGTTGATACTAACATTTTGTTGGTGGGTTATCCCTATCCAAACCCATAAAAAGCTTAAGAAATGTGGGTTTGGAGGGCCAACCCCAAGTTTTCCATTTGGAAATATTAAAGAGATGAAAAGAAAGAATAGCATTAAATCTTCAGTTATATCCTCAAATCTCTCGCATGATATTCACTCCTACGTTTTTCCATACTTTTCTAGCTGGCAGAAATCACATGGTAAGGTTTTTGTGTACTGGTTGGGAACGGAGCCATTTTTGTACATTGGAGAGGCAGAGTTTTTGAAGAAGATGTCAACAGAAGTGATGGCAAAGAGATGGGGAAAGCCAAGTGTGTTTAGAAATGATAGAGACCCAATGTTTGGTAGTGGTTTGGTGATGGTTGAAGGAAACGATTGGGTTCGTCACCGTCACATTGTTGCCCCCGCATTCAACCCCATTAACCTCAAGGTCATGGCAAACAGGATGGTTGAGTCTTCAAATCAAATGATAGGAAGATGGACAACCTTAATAAACAATGGAAACCCAGAAATTGACGTGGAGAGAGAGATTATAGCAACAGCTGGTGAGATCATAGCAAAAACAAGTTTTGGGATGGAAGATGAGAATGCTAGAGAGGTTTTTGACAAATTAAGAGCCTTACAAATGACTCTCTTCAAGACCAATAGGTATGTTGGGGTTCCCTTTGGCAAGTATTTCAATGTGAAGAAAACACTAGAGGCCAAGAAACTTGGGAAAGAAATCGACCAGCTCTTGTCTTCCATCATTGAAGAGCGTAAGAAATCACCCAAAAAGAATTCCCAACAAGATTTATTAGGTTTGTTGCTCAAAGAAAATTCAGGAAAGACACTAACAACAAGGGAAGTTGTTGATGAATGCAAGACCTTCTTCTTTGGTGGCCATGAAACCACAGCACTTGCTATCACATGGACTTTGCTTCTCTTAGCTATACATGAAGATTGGCAAAACCAATTGAGAGATGAGATAAGAGAAGTGGTGGGAAACAACGACCTTGATATCACTATGCTTGCTGGTCTAAAGAAGATGAAGTGTGTGATGAATGAAGTTCTAAGACTGTACCCACCAGCACCAAATGTGCAAAGGCAAGCAAGGGAAGATATTCAAGTGGGTGATTTAACGGTGCCTAATGGAACCAATTTGTGGATTGATGTGGTAGCGATGCACCATGACCCTGAATTATGGGGGAAGGATGTGAATGAGTTCAAGCCAGAGAGGTTCATGGATGATGTGAATGGTGGATGCAACCATAAGATGGGGTACTTGCCATTTGGGTTTGGAGGGAGGATGTGTGTTGGTAGGAACTTGACATTCATGGAGTATAAGATTGTATTAACACTACTTCTCTCTAGGTTCACTTTTAAGGTTTCCCCAGGTTACCATCATTCACCGTCTATCATGCTCTCCCTTAGGCCCACTCATGGCCTTCCACTCATAGTTCAGCCACTTTAG 1524 0.4147 MEFLGVLVAFLAAFCFLLLLILTFCWWVIPIQTHKKLKKCGFGGPTPSFPFGNIKEMKRKNSIKSSVISSNLSHDIHSYVFPYFSSWQKSHGKVFVYWLGTEPFLYIGEAEFLKKMSTEVMAKRWGKPSVFRNDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPINLKVMANRMVESSNQMIGRWTTLINNGNPEIDVEREIIATAGEIIAKTSFGMEDENAREVFDKLRALQMTLFKTNRYVGVPFGKYFNVKKTLEAKKLGKEIDQLLSSIIEERKKSPKKNSQQDLLGLLLKENSGKTLTTREVVDECKTFFFGGHETTALAITWTLLLLAIHEDWQNQLRDEIREVVGNNDLDITMLAGLKKMKCVMNEVLRLYPPAPNVQRQAREDIQVGDLTVPNGTNLWIDVVAMHHDPELWGKDVNEFKPERFMDDVNGGCNHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSRFTFKVSPGYHHSPSIMLSLRPTHGLPLIVQPL. 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07382 507 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 499 - -
Seca8g07382 507 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07382 507 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07382 507 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07382 507 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07382 507 Gene3D Cytochrome P450 26 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07382 507 Pfam Cytochrome P450 81 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07382 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Seca8g07382 507 SUPERFAMILY Cytochrome P450 76 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07382 507 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07382 507 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07382 507 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07382 507 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07382 507 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07382 507 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07382 507 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07382 Seca-Chr8 170678555 170681387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07382 9 507 Cytochrome P450 AT5G52400 60.990 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07382 - - gmx:100785284 857.055