Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07379 ATGATTCACTTCTTTTCTTTGAAAATGAACTTCGTCGTGGCTTTCTCATTCTTCTATCTAACAACATTGGCGCCATGGTGCGTTCGCTCGGATCAGAGACTTATGGTGAACATGACGCTGGTTCCGAATGCTCGTGCTACCGGTGCTCTTTGTTTGGACGGGAGTTTACCGGCGTATCATTTGCACAGAGGATTTGGAGCAGGACAAGACAACTGGCTTCTACAGTTTGAGGGAGGTGGGTGGTGCAATGACTTGACATCATGCTTGGAGAGAGCCCAATCTCGCAGGGGTTCAACAAGTTACATGACCAAGTTGGAGGTCTTCTCTGGTATTTTAAGCAACAATGCCACCCTTAATCCAGACTTTTACAATTGGAACCGTGTGAAGCTGAGATATTGTGATGGAGCTTCATTTACTGGAGACAATGTGTTCAATAATGGGACAACAAAGCTTTACTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTGAAGACCTTCTACCAAAAGGTTTGGGAAAGGCACGCAAGGCTTTGCTTTCAGGTTGTTCAGCAGGAGGTTTAGCGACCTTCCACCATTGTGACAACTTCGCCAAGTATTTGCCAATAAATGCTAGTGTTAAATGCTTGAGTGATGCAGGTTTTTTCCTTGACGAAAGAGATATAAGTTTGAACCACACTATGAGGTACTTCGTCAAAAGTCTAGTTTCATTGCAGGGGATAGAGCAGAACCTGAATAGAAACTGCACCAGCGCGCTGTTCTTTCCGGACTTGTGCTTCTTTCCACAGTATGCGTTGAGATACATATCGACACCATATTTTATCTTGAACTCTGCCTATGATGTATTCCAATTCCATCATATATTGGTGCCACCTTCTGTCGATATGCACGGACACTGGAACCACTGTAAGCTGAACCCAGCAGCATGCACACCCGACCAAATTAATACATTGCAAGGTTTTAGGCTCCACATGCTTGCAGCTTTGAGACCGTTCTATATATATTCAAGAAGAGGGGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAATTACAAGATACATGGTTTGGAGCAGATTCTCCAAGAATAAACAATAAGGTCACTTGGAAGATTAAACTGAAAATTTGTCCACAAGCTCCTCCAGTTCTCATAGAGAATATCTACCCCCAACGCCAGCACCACCACCCTCTCTCCCGAAATTACCAAAATACCATCCACGTTATGCATAACCAATCCACAGTCTTACTCAGACTTCCCACATTGCCCTCTCTCTCTTTCATCTTCCTTCATCCCACAAAGGTAAAGCTCAGCAACAACAAGAATTGCACGAAAAGGAGACACACTCCCACTCCCTTCATCACAAGAAGCAATTGGGTTGTCCCTAAGGCAATAATGCGTTGCTCTTCCTTCAGCTCTCACTCTGGCGGTGATGACACCAACGACATCAACAACAATAACGGTGCCTCATTCCGCAACTTCAAGCTGAACGAGTCAACCTTCTTGGCTTCCCTCATGCCCAAGACAGAGATTGGCGTCGACCGTTTCCTCCATTCTCATCCACACTACGATGGCCGTGGTGCTCTCATCGCTATCTTCGATTCTGGTGTAGATCCAGCTGCTGCTGGATTACAGGTTACCTCAGATGGGAAACCAAAAATTCTTGATATCCTTGATTGCACTGGGAGTGGAGATATTGATACCTCAAAGGTGGTGAAGGCTGATGCTGATGATTGTATATCTGGGGCATCAGGAGCATCTTTGGTTATCAATACTTCATGGAAAAATCCATCTGGTGAATGGCATGTGGGTTATAAATTGGTTTACGAGCTCTTTACAGAAAAATTGACTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAATGGGACGAGAAAAACCAGGAGGAAATTGCTAAGGCTGTCAAACAACTTAATGATTTTGATCAGCAACACATCAAGTTGGAGGATGCAAAACTTAAAAAGGCTGGTGAAGATCTCCAGCATAGACTTGATCTTCTTAGAAAGCAATCTGAGAGCTACAATGATAAAGGGCCTGCCATAGATGCTGTCGTCTGGTATGATGGAGAGGTTTGGAGGGTTGCTCTTGACACACAGAGTCTTGAGGATGATCCAGATTGTGGGAAGCTTGCTGACTTTGTACCCTTAACTAATTATAGGACTGAGAGGAAGTATGGCGTCTTCAGCAAATTAGATGCTTGTACATTTGTTGCGAATGTCTATAATGATGGGAATGTCTTAAGTATTGTAACAGACAGCTCTCCTCATGGCACCCATGTTGCTGGTATAGCTACTGCATTCCACCCAGAGGAACCTTTGTTAAATGGAGTTGCGCCTGGAGCACAATTAATATCGTGTAAAATTGGGGACTCTCGCTTAGGTTCAATGGAAACTGGAACTGGTTTGACTCGGGCACTGATAGCTGCTGTGGAGCATAAATGTGATCTTATCAACATGAGTTATGGTGAGCCAACATTGCTGCCAGACTATGGACGCTTTGTTGACCTTGTGAATGAAGTGGTAAGCAAACACCGTCTGATATTCGTGAGCAGTGCTGGTAATAGTGGGCCAGCATTAAGCACTGTTGGTGCACCTGGTGGTACATCTTCAAGTATTATAGGTGTTGGCGCTTATGTTTCTCCTGCTATGGCAGCTGGTGCCCACTGTGTTGTTGAACCACCATCCGAGGGGCTTGAATACACTTGGTCTAGCCGAGGACCAACAGTTGATGGAGATCTTGGTGTTTGTGTAAGTGCTCCTGGTGGTGCTATTGCTCCTGTTCCTACATGGACTCTTCAACGACGTATGCTCATGAATGGGACATCAATGGCATCTCCATCAGCCTGTGGGGGAATTGCATTGCTCATAAGTGCAATGAAGGCTGAGGGAATTCCTGTGAGTCCATTTAGTGTGAGGAAGGCCCTTGAGAATACATCTGTTCCCATAGGTGATTCACCTGAGGATAAATTATCCACTGGGCAAGGGCTTATGCAAGTTGACAAGTGTTATGAATATATACAGAAGTCTCAAAATTTTCCATGTGTTTGGTATCAAATAAACATCAAGCAATCTGGAAAAACAAATCCTTCATCACGGGGCATATACCTGAGGGAGGCTAATGCTTGCCGACAATCTACTGAGTGGACTGTGCAAGTTGATCCAAAATTTCATGAAGATGCCCACAAGCTTGAAGAATTGGTTGTATTTGAGGAGAGCATAGAGTTACACTCTTCGGATAGGACAGTTGTGAAAGCCCCCGAGTACCTAATGCTCACTCATAATGGCCGTACCTTCAACATATTTGTGGATCCTACCAATCTGTGTGATGGTCTGCATTATTATGAGGTCTATGGTATTGACTGCAAAGCACCATGGCATGGTCCTCTTTTCAGAATTCCAATTACTATAACCAAGCCTGTGGCTGTAACTAATAGACCTCCACAGGTTTCATTTTCAAAGATGATATTCCAGCCAGGCCATATAGAAAGGAAATATATAGAAGTGCCACAAGGTGCATCTTGGGTTGAAGCAACCATGAACACTTCAAGTTTTGATACAGCTCGAAGATTTTTTGTGGACACAGTTCAGATATGTCCATTGCAAAGACCTATTAAATGGAGGAATGTGATAACTTTTTCTTCTCCTGGTGCCAAAAGCTTCATCTTTAGGGTAGTAGGGGGTCAGACATTGGAACTAGTCATAGCTCAGTTTTGGTCAAGTGGCATAGGGAGTCATAAGACAACCAGTGTGGATCTTAAGGTAACAGAATTCATGTTTGTATGA 3801 0.4373 MIHFFSLKMNFVVAFSFFYLTTLAPWCVRSDQRLMVNMTLVPNARATGALCLDGSLPAYHLHRGFGAGQDNWLLQFEGGGWCNDLTSCLERAQSRRGSTSYMTKLEVFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGDNVFNNGTTKLYFKGQKIWEAIIEDLLPKGLGKARKALLSGCSAGGLATFHHCDNFAKYLPINASVKCLSDAGFFLDERDISLNHTMRYFVKSLVSLQGIEQNLNRNCTSALFFPDLCFFPQYALRYISTPYFILNSAYDVFQFHHILVPPSVDMHGHWNHCKLNPAACTPDQINTLQGFRLHMLAALRPFYIYSRRGGMFINSCFAHCQSELQDTWFGADSPRINNKVTWKIKLKICPQAPPVLIENIYPQRQHHHPLSRNYQNTIHVMHNQSTVLLRLPTLPSLSFIFLHPTKVKLSNNKNCTKRRHTPTPFITRSNWVVPKAIMRCSSFSSHSGGDDTNDINNNNGASFRNFKLNESTFLASLMPKTEIGVDRFLHSHPHYDGRGALIAIFDSGVDPAAAGLQVTSDGKPKILDILDCTGSGDIDTSKVVKADADDCISGASGASLVINTSWKNPSGEWHVGYKLVYELFTEKLTSRLKKERKKKWDEKNQEEIAKAVKQLNDFDQQHIKLEDAKLKKAGEDLQHRLDLLRKQSESYNDKGPAIDAVVWYDGEVWRVALDTQSLEDDPDCGKLADFVPLTNYRTERKYGVFSKLDACTFVANVYNDGNVLSIVTDSSPHGTHVAGIATAFHPEEPLLNGVAPGAQLISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEPTLLPDYGRFVDLVNEVVSKHRLIFVSSAGNSGPALSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGPTVDGDLGVCVSAPGGAIAPVPTWTLQRRMLMNGTSMASPSACGGIALLISAMKAEGIPVSPFSVRKALENTSVPIGDSPEDKLSTGQGLMQVDKCYEYIQKSQNFPCVWYQINIKQSGKTNPSSRGIYLREANACRQSTEWTVQVDPKFHEDAHKLEELVVFEESIELHSSDRTVVKAPEYLMLTHNGRTFNIFVDPTNLCDGLHYYEVYGIDCKAPWHGPLFRIPITITKPVAVTNRPPQVSFSKMIFQPGHIERKYIEVPQGASWVEATMNTSSFDTARRFFVDTVQICPLQRPIKWRNVITFSSPGAKSFIFRVVGGQTLELVIAQFWSSGIGSHKTTSVDLKVTEFMFV. 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07379 1266 Pfam Pectinacetylesterase 30 369 IPR004963 GO:0016787
Seca8g07379 1266 PRINTS Subtilisin serine protease family (S8) signature 945 961 IPR015500 -
Seca8g07379 1266 PRINTS Subtilisin serine protease family (S8) signature 758 771 IPR015500 -
Seca8g07379 1266 PRINTS Subtilisin serine protease family (S8) signature 526 545 IPR015500 -
Seca8g07379 1266 ProSiteProfiles Serine proteases, subtilase domain profile. 511 1009 - -
Seca8g07379 1266 FunFam Tripeptidyl-peptidase 2 homolog 686 1019 - -
Seca8g07379 1266 FunFam Tripeptidyl-peptidase 2 570 631 - -
Seca8g07379 1266 Gene3D - 1022 1156 IPR046940 -
Seca8g07379 1266 SUPERFAMILY Subtilisin-like 396 1019 IPR036852 GO:0004252|GO:0006508
Seca8g07379 1266 Gene3D - 570 641 - -
Seca8g07379 1266 FunFam Tripeptidyl-peptidase 2 1022 1153 - -
Seca8g07379 1266 Gene3D Peptidase S8/S53 domain 687 1019 IPR036852 GO:0004252|GO:0006508
Seca8g07379 1266 Pfam Subtilase family 526 988 IPR000209 GO:0006508|GO:0008236
Seca8g07379 1266 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 506 988 IPR034051 GO:0006508|GO:0008240
Seca8g07379 1266 ProSitePatterns Serine proteases, subtilase family, histidine active site. 762 772 IPR022398 -
Seca8g07379 1266 PANTHER NOTUM-RELATED 23 372 IPR004963 GO:0016787
Seca8g07379 1266 Coils Coil 663 683 - -
Seca8g07379 1266 ProSitePatterns Serine proteases, subtilase family, serine active site. 946 956 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07379 Seca-Chr8 170616637 170643077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07379 9 369 Carbohydrate Esterase AT5G23870 66.022 4.73e-170 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07379 K01280 - gmx:100787184 1484.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07379 8 170616637 170643077 Seca8g07379 8 170616637 170643077 ECH