Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07361 ATGGCAGCAAAGGTGGTGAAGAATGAAGAACATCTGAATCTGAAAATCACATGTAAAAGCCATGTGAAGCCTAACAAGAAAATTGGGAAGAAGGAGTGTCAACTGGTTTCATTTGATCTTCCCTACCTAGCTTTCTACTATAACCAGAAGCTACTTTTTTACAAAGGGGATGATTTTGAGGGAATGGTGAAGAAACTGAAAGATGGACTTAGTGTCGTCTTGGAAGATTTCTATCAATTAGCTGGTAAGCTTGGGAAAGATGAGGAGGGTGTGTTCAGAGTGGAATATGATGATGACATGGCTGGTGTGGAGGTCATAGAGGCAGTTGCTGATGAGATTGAGGTAGCATCTCTAACTGTGCCAGAGAGTAATAACAGCACTTTTAAGCAGTTGGTACCTTACACTGGGATCTTTAATTTGGAAGGGATGCACAGGCCCTTGTTGGCAATTCAGTTAACCCAGCTCAAAGACGGACTTGCGATTGGGTGTGCTTTCAACCACGCGACCCTTGATGGAACCTCTACATGGCACTTTATGAGCTCATGGGCCGAGATATGTCGTGGTGCTCCCTCTACATCAACCTTACCATTCCTTGAACGAACCAAGGCCCGAAAGACACGTGTGAAGCTCAACCTCACTCTTCCTTCAGGCCCACCTCCAACATCCAACGGCGATGCGGAGACCAAGCTTGACCCACCACTGAGGGAAAGGATCTTCAGGTTTTCCGAGTCGTCCGTTCAAAAAATCAAGTCAACGATCAATGGAAAACCTCAATCGGATGACTCAAAGCCATTCTCAACATTCCAGGCCCTCTCAGTTCATATTTGGCGCCACGTGAGCCATGCACGCAACCTTAAACCTGAAGACTACACCGTATTCACTGTCTTTGCAGATTGTCGGAAACGAGTTGACCCGCCAATGCCATATGCTTATTTTGGAAACTTAATTCAAGCCATATTTACCGTCACAACAGCAGGGTTATTGTTGAAACATCCACCACAATTTGGGGCTTCGTTGATACAGAAAGCCATTGAAGGACACAATGCCAAAGAAATTGATGAACGTAACAAAAAGTGGGAAAATGCACCAAAGATCTATGAATTTAAAGATGCAGGAGTGAATTCTGTGGTGGTAGGTAGTTCACCAAGGTTTAGGGTTTACGATGTGGACTTCGGATGGGGGAAGCCAAAAAATGTTAGGAGTGGCTCCAATAACAAGTTTCATGGGATGATTTATTTGTATCCAGGGAAGAATGGAGGGAGCAGCATTGACGTGGAGCTAACCTTGGAGGTTGAAGCTATGGGAAGATTGGAGCAAGATAAAGAATTTCTTATGGAGGTTAATTAG 1347 0.4447 MAAKVVKNEEHLNLKITCKSHVKPNKKIGKKECQLVSFDLPYLAFYYNQKLLFYKGDDFEGMVKKLKDGLSVVLEDFYQLAGKLGKDEEGVFRVEYDDDMAGVEVIEAVADEIEVASLTVPESNNSTFKQLVPYTGIFNLEGMHRPLLAIQLTQLKDGLAIGCAFNHATLDGTSTWHFMSSWAEICRGAPSTSTLPFLERTKARKTRVKLNLTLPSGPPPTSNGDAETKLDPPLRERIFRFSESSVQKIKSTINGKPQSDDSKPFSTFQALSVHIWRHVSHARNLKPEDYTVFTVFADCRKRVDPPMPYAYFGNLIQAIFTVTTAGLLLKHPPQFGASLIQKAIEGHNAKEIDERNKKWENAPKIYEFKDAGVNSVVVGSSPRFRVYDVDFGWGKPKNVRSGSNNKFHGMIYLYPGKNGGSSIDVELTLEVEAMGRLEQDKEFLMEVN. 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07361 448 FunFam Tryptamine hydroxycinnamoyl transferase 220 441 - -
Seca8g07361 448 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 444 - -
Seca8g07361 448 Gene3D - 220 440 IPR023213 -
Seca8g07361 448 Pfam Transferase family 14 443 - -
Seca8g07361 448 Gene3D - 11 212 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07361 Seca-Chr8 170386000 170389584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07361 66 447 Monolignol Biosynthesis Gene Families AT5G48930 27.681 6.97e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07361 K19747 - gmx:100818158 701.434