Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07352 ATGTCGTCACCGGGGTTCACGGGCGGTGGAGCCTCGGATTTCTTCGGCGGCGCAGCAGGTTTTTCCGGCAGATCCATGACACTTCCACCACCCAACATGAACAACAACACCAACCCTTCAACCACCGCCACCACCCACCACAATCTCCACCCTCTCTACCGAACCCAGCAGCAACTCCCCGCAATTTTCCTTGATCCTTCTTCCTCCCACATCGCCCAGCGCCAAACACCTTCCCTCATAGGTAAACGCACCCTCGCCGAATTTCAAACCCAAAACCACACCCTTAGCAATCTCCACAGCCTCAATAACCATAACCCTATCCTTTCCAACCTTCTACTTCGTTCTGTCAAGCCCAGGACTTTCCGCCATGGCTCTCCTATGTCCCCTCTTTCTGTTGATGCTGATGAGTTCTGCAGCCTCTCCTCCTCTGAATTGTCACAGCGTTTAGGCATGCCCCTACTTCACCAGCTTCGTCCAAACCCCGTTGGTCTAACCACCCCTCAACAAACCCCATTACCCATGACCAATTCCAATTACATCCTCTCAAACACGAATTTCTCATACCCAAATCCCAATTTGACGCAGCTGCAGAACAGAGTACCAAAAACCACTCATGTACCAGAGAAAAAGATGATGGACCATCGCCTACAGGAGCTGGAAAAGCAGCTTTTGGAAGACAATGATGACGAAGAAGGCGATGGAGTTTCTGTGATTACTAACTCTGAATGGTCAGAGACAATACAGAACTTGATCACTCCCCCAACACAGAAACCAGTTTCATCATCGCCTACTTCCTCAACGACGTCGTCGAACTCCACCTCTTCCTCTCTGGCTTCCCCTGCTTCCACCTGTTCCAAACAGTCGTTAATCGAGGCTGCATCCGCGATTTCCGAAGGGAAATTGGAGGCTGCGTCGGAGATCCTTAATCGCTTGACTCAGGCTCCAAACCCTAACGGGAATTCGGATCAAAGATTCACGGATTGCATGGTTTCGGCGCTGAAATCGCGCATGAACCTGGTTGAAAACCCACCACCCGTGGCGGAACTGTTCAGCAAGGAACACGCCGAGTCAACTCAGTTGCTCTTTGAACACTCCGTCTGCTTCAAGGTCGCTTTCATGGCTGCCAACCTCGCAATTCTCGAAGCCGCATTCGATGATAGAACCGATAACATGAAGCTCTGCTTCGTCGATTTCGATATCGGGCATGGGAGGCAATATGTGAGCCTTCTCCACGAGCTTTCCGCTCGTCTCAACGGCACGCCGGCGACGGTCAAGATCACCGCGGTGGCAGAGAACGCCGCCGACGAGAGGTTGAAGACGGTGGGCGAGGTTTTGGGTCGACAAGCGGAGCGGCTCAGGATCGGATTTGAATTCAAAGTGGTAACTCAAAAACTCGCCGAGTTAACCCGCGAGTCGCTGGGTTGTGACACGGACGAGTTTCTGGCTGTGAACTTCGCGTTCAAGCTTTTCAGAATGCCTGACGAGAGCGTGTCGACGGAGAACCCACGCGATGAGCTTCTCCGGCGCGTGAAGGCACTCGCGCCGCGTGTGGTGACGCTTGTGGAGCAAGAGATGAACACCAATACGGCGCCGTTTGTGGCCCGCGTGGCCGAGTCATGCTCTTATTATGGCGCGCTGTTTGAGTCAATTGATTCCACGATGGCGCGGGATAACTCGGAGCGTGTCAAGATTGAGGAGGGACTGAGTCGGAAGCTGGGTAACTCGATCGCTTGCGAAGGGAGGGATCGCGTGGAACGGTGCGAGGTGTTTGGGAAATGGCGCGCACGCATGAGCATGGCTGGGTTCAGATTGAAACCGGTGAGTCAGAAGGTGGCCGAGTCAATCAATGTGCGACTCGGTCCCGGAAACCGAGTCACGGTGAAAGAAGAGAACGGTGGGGTTTGCTGTGGGTGGATGGGAAGAACTCTCACCGTCGCATCTACTTGGCGTTAA 1953 0.5361 MSSPGFTGGGASDFFGGAAGFSGRSMTLPPPNMNNNTNPSTTATTHHNLHPLYRTQQQLPAIFLDPSSSHIAQRQTPSLIGKRTLAEFQTQNHTLSNLHSLNNHNPILSNLLLRSVKPRTFRHGSPMSPLSVDADEFCSLSSSELSQRLGMPLLHQLRPNPVGLTTPQQTPLPMTNSNYILSNTNFSYPNPNLTQLQNRVPKTTHVPEKKMMDHRLQELEKQLLEDNDDEEGDGVSVITNSEWSETIQNLITPPTQKPVSSSPTSSTTSSNSTSSSLASPASTCSKQSLIEAASAISEGKLEAASEILNRLTQAPNPNGNSDQRFTDCMVSALKSRMNLVENPPPVAELFSKEHAESTQLLFEHSVCFKVAFMAANLAILEAAFDDRTDNMKLCFVDFDIGHGRQYVSLLHELSARLNGTPATVKITAVAENAADERLKTVGEVLGRQAERLRIGFEFKVVTQKLAELTRESLGCDTDEFLAVNFAFKLFRMPDESVSTENPRDELLRRVKALAPRVVTLVEQEMNTNTAPFVARVAESCSYYGALFESIDSTMARDNSERVKIEEGLSRKLGNSIACEGRDRVERCEVFGKWRARMSMAGFRLKPVSQKVAESINVRLGPGNRVTVKEENGGVCCGWMGRTLTVASTWR. 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07352 650 MobiDBLite consensus disorder prediction 250 281 - -
Seca8g07352 650 MobiDBLite consensus disorder prediction 22 46 - -
Seca8g07352 650 Pfam GRAS domain family 286 650 IPR005202 -
Seca8g07352 650 MobiDBLite consensus disorder prediction 27 46 - -
Seca8g07352 650 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 260 638 IPR005202 -
Seca8g07352 650 ProSiteProfiles GRAS family profile. 276 650 IPR005202 -
Seca8g07352 650 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07352 Seca-Chr8 170260361 170268139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07352 36 650 GRAS Transcription Factor Family AT5G52510 49.844 1.35e-168 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca8g07352 GRAS 1.3e-98 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07352 - - tpra:123914170 796.193