Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07348 ATGGACACCCAAAAGATTATATCTTTAATTTTTCTCTTTCTCATTCCTTTCTCAGTTTCCTTCACTCCCACAGACAACTACCTTCTTAACTGTGGATCACACAACAATGCTTCCCTCTTCAACAGAGTCTTCATTAGCGATTTCACCAACCCAGGTTCCACTTTTCTCTCTTCAGATGATTCAATTTCTCTCACAAACCAAAAGCCACCTCCAAATTTGCCCTCTGTGTACCACACAGCAAGAGTTTTCACCACCACAGGGAGATACAGGTTCAACATGAAGAAAAACGGTACCCACTTGGTGCGTTTTCATTTCTCCCCCTTTAAAGCTCAAAATTTTGATCTTAAATCTGCAAAATTTGGTGTCTTGGTTAATGGGATTTCGGTTCTGAGGGAATTCCAGCCACCTAATGATGTTCTGCTCAAAGAGTTTATTTTGAAGGTAGAATCAAACTTGCTTGAAATTTTGTTTAGGCCTGTTGGTAACTCAGGTTTTAGCTTTGTCAATGCTGTGGAGGTTTTTACTGCTCCTTCAGATTTTGTTATAGATTATGGAACCAGGTTGATTGGTCCTTCTGGAGTGGAGGAATACAAAAACCTTTCATCTCAGGTTTTAGAAACTATTCATAGGATTAATGTTGGAGGTATGAAAATAACTCCTTTCAATGACACCCTTTGGAGGACTTGGATTCCTGATGAGGATTATCTTGTTTTTAAGGATGCAGCTAAGCCTGCAGTAACCACTCACACACCAAATTACCAGAAGGGAGGTGCAACTAGAGAGATTGCACCTGAAAATGTTTACATGACTGCTCAGCAGATGAACAGGGAAAACTCAAGTTTAGCTTCAAGATTCAACATAACATGGAATTTCCCTGTGGCTCCTGGTGATGTTCCACACTTGGTTCGGTTGCATTTCTGTGATATTGTTAGTCCTTCTCTGAACTTGCTCTACTTTGATGTGTATATCAATGGTTACATTGCATATAAGGATCTTGATTTGTCAACCCTTACAATCCACACCCTTGCATCACCGGTCTATGTGGATTTTGTTGTGAATTCAGATGATTCAGGTGTTATTGAAATTAGTGTTGGTCCTTCTGACCTGAGCAGTAATATAAGGATGAATGCCATATTGAATGGTGCAGAAATTATGAAGATTGTCAATGATGTTGATACTCATGTTGTGCACAGGAGGAAAAATTTGTGGGTGTTGGTGGGTTCAATTGTTGGAGGAATTGTTGTCTTATTTTTAGTTGTAGCTGCTTTTCTACTTGGTACCAAATGCAGGAAGAGGAAACCAAAACAAAGGACAGTGGAGAGTGTTGGATGGACGCCTCTACGAATGTTTGGAGGGAGTTCCCTTAGTAGATCTTCTGAACCTGGTTCTCATGGATATCTTGGTTTGAAGATCCCTTTTGCTGAGATACAATTAGCAACAAACAATTTTGATAGAAGTTTGATTATAGGGTCTGGTGGGTTTGGTATGGTCTACAAGGGAGTACTCAGAGACAATGTCAAGGTTGCTGTCAAGAGAGGTATGCCTGGTTCAAGACAAGGCCTTCCAGAATTCCAGACTGAAATAACAGTTTTATCCAAAATTCGCCATCGCCACCTTGTTTCACTAGTTGGATTTTGTGAAGAAAATTCAGAAATGATACTTGTCTATGAGTATGTGGAAAAAGGTCCACTGAAAAAACATTTATATGGTTCAGCAAGACTACCACCACTCTCTTGGAAGCAGCGTCTTGAAATATGCATTGGTGCAGCTAGAGGTCTCCACTATCTTCACACTGGTTTTGCTCAAGGAATCATCCACCGTGACATTAAATCAACCAATATATTGCTTGATGAAAATTATGTGGCTAAAGTTGCTGACTTTGGTCTTTCAAGATCTGGGCCTTGCATCAATGAAACACATGTGAGTACTGGTGTGAAAGGTAGTTTTGGTTATCTTGATCCTGAGTATTACCGGAGGCAACAACTTACAGATAAATCAGATGTTTATTCATTTGGGGTTGTGCTTTTTGAGGTTCTTTGTGGCAGACCTGCTGTTGATCCACAATTAACAAGGGAACAGGTGAATTTAGCAGAATGGGCACTTGAATGGTTGAAGAAGGGCATGCTGGAACATATTGTTGACCCCTATCTTGTTGGACAGATCAAACCAAGCTCATTGAAGAAATTTGGTGAAACAGCAGAGAAATGTTTGGCTGAATACAGTGTTGACAGGCCAACTATGGGTGATGTCTTATGGAATTTGGAACATGCATTTCAGTTACAAGAAAGTGATAGCAGTGCTGATGAATCAGTGAGTGTAACAACTACAATTATGCCTGAAAATCCTTCTACCAACATAAGAACAGAGAGAGATTATGGTAATGGTTGTTCAGATGTAAGTACTAGTGAAGTATTTTCTCAGCTAATGACCAATGAAGGCAGATAG 2445 0.3988 MDTQKIISLIFLFLIPFSVSFTPTDNYLLNCGSHNNASLFNRVFISDFTNPGSTFLSSDDSISLTNQKPPPNLPSVYHTARVFTTTGRYRFNMKKNGTHLVRFHFSPFKAQNFDLKSAKFGVLVNGISVLREFQPPNDVLLKEFILKVESNLLEILFRPVGNSGFSFVNAVEVFTAPSDFVIDYGTRLIGPSGVEEYKNLSSQVLETIHRINVGGMKITPFNDTLWRTWIPDEDYLVFKDAAKPAVTTHTPNYQKGGATREIAPENVYMTAQQMNRENSSLASRFNITWNFPVAPGDVPHLVRLHFCDIVSPSLNLLYFDVYINGYIAYKDLDLSTLTIHTLASPVYVDFVVNSDDSGVIEISVGPSDLSSNIRMNAILNGAEIMKIVNDVDTHVVHRRKNLWVLVGSIVGGIVVLFLVVAAFLLGTKCRKRKPKQRTVESVGWTPLRMFGGSSLSRSSEPGSHGYLGLKIPFAEIQLATNNFDRSLIIGSGGFGMVYKGVLRDNVKVAVKRGMPGSRQGLPEFQTEITVLSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSARLPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCINETHVSTGVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPQLTREQVNLAEWALEWLKKGMLEHIVDPYLVGQIKPSSLKKFGETAEKCLAEYSVDRPTMGDVLWNLEHAFQLQESDSSADESVSVTTTIMPENPSTNIRTERDYGNGCSDVSTSEVFSQLMTNEGR. 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07348 814 FunFam Putative receptor-like protein kinase 26 177 - -
Seca8g07348 814 SMART serkin_6 483 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07348 814 Pfam Protein tyrosine and serine/threonine kinase 488 748 IPR001245 GO:0004672|GO:0006468
Seca8g07348 814 Gene3D - 204 389 - -
Seca8g07348 814 Gene3D - 26 178 - -
Seca8g07348 814 FunFam Receptor-like protein kinase FERONIA 204 389 - -
Seca8g07348 814 FunFam receptor-like protein kinase FERONIA 452 558 - -
Seca8g07348 814 FunFam Receptor-like protein kinase FERONIA 559 772 - -
Seca8g07348 814 PANTHER OS07G0166700 PROTEIN 470 761 IPR045272 GO:0004714|GO:0006468
Seca8g07348 814 ProSitePatterns Protein kinases ATP-binding region signature. 489 511 IPR017441 GO:0005524
Seca8g07348 814 Gene3D Transferase(Phosphotransferase) domain 1 559 778 - -
Seca8g07348 814 Pfam Malectin-like domain 29 387 IPR024788 -
Seca8g07348 814 ProSiteProfiles Protein kinase domain profile. 483 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07348 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Seca8g07348 814 Gene3D Phosphorylase Kinase; domain 1 456 558 - -
Seca8g07348 814 SUPERFAMILY Protein kinase-like (PK-like) 469 752 IPR011009 -
Seca8g07348 814 CDD STKc_IRAK 489 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07348 Seca-Chr8 170186609 170189077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07348 6 814 Receptor kinase-like Gene Family AT3G46290 48.687 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca8g07348 Malectin_like 9.5e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07348 - - gmx:100801169 1395.56