Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07333 ATGGCAGACCAGTCACCACAATTGTCTCCAAAAACTTACAAACTAACAGCTACTTCAATCTCCTACACCAAATCAACATCCACCAACAGCACCTTTGCATTTGCACCATTCTTCCTCTTCAAACATTGTACATCAACCCCACCAACTTACATCCTCAAAGATGTCTCCCTCACAGCTTATCCCTCTGAGATCCTAGCCATTGTAGGTCCAAGTGGTGCTGGAAAATCCACTCTTTTAGACATTCTTTCTGCTCGAACATTACCCTCCAATGGTTCTCTTTCCCTTAACTCTTCCCCTCTCAACCCTTCCTCCTACCGCAAACTCTCTGCCTATGTCCCTCAACATGATGCATGTCTCCCTCTGCTTACTGTTTCTGAAACTTTTGCTTTCTCTGCTCGCCTTCTCAAGCCTAAGACTTGTGATATTGTTACCATTGTTTCCTCTCTTCTCACTGAACTGAGACTGACCCATTTGGCTAACACAAGGCTTGCTCATGGCCTATCTGGTGGAGAACATAGAAGGGTCTCCATTGGTTTGAGTCTTCTTCATGATCCTGCTGTTTTGCTCCTTGATGAACCCACTTCTGGTCTTGACAGTACCTCTGCTTTCAAAGTCATGCAAATTCTCAAATCAACTTGTGTTTCTAGAAACAGGACAATTATCCTCTCCATTCACCAACCCAGCTTCAAGATCCTCTCTTGTATTGATAGAATTTTACTTCTATCAAAAGGGACTGTGGTTCATCAAGGAAGCATTGCTTCACTCCAAGCATTCTTGCACTCAAAAGGGTTCACTGTCCCTCATCAGCTCAATGCCTTGGAATATGCAATGGAAATACTAAACCAATTGAATGAGGTTAAACCCATCACTCTCCCAAGTCTCCCTGAATCACCAGAAAGTTCTACAAGTTCTCTAATGTCTGACAATGAAACTACAACAACCAAAGAGATCAGGTACAAGAGTTCTAGGATTCATGAAATCTGTACTCTTTATAGCAGGTTTTGGAAGATCATTTACAGAACAAGGAAACTTCTTTTGACAAACACAGCAGAAGCACTTATTGTGGGTCTTGTTTTAGGAACAATTTATATCAATATTGGTTTTGATAAGGAAGGTATTGAGAAAAGGTTTGGTCTTTTTGCCTTCACTCTCACATTCCTCTTATCCTCCACAACTGAGACACTTCCCATCTTTATCAATGAGAGGCCAATCTTGCTAAGAGAAACTTCAAGTGGGGTTTATAGGCTATCATCTTATCTAATTGCAAACACACTTGTTTTCTTGCCATACTTGCTGGTGGTTGCTATCATATACTCCATCCCAGTCTACTTCCTAGTGGGTCTTTGTGCTTCTTGGCTATCTTTTGCTTATTTTGTTTTGGTGATATGGGTCATAGTTCTAATGGCAAACTCATTTGTCCTCTTTTTGAGTTCTCTTGCTCCAAACTACATTGCTGGGACTTCACTCTTGACAGTACTTCTTGCAGCATTTTTTCTATTCTCTGGCTACTTTATCTCAAAGGATAGCTTACCAAAATACTGGCTCTTCATGTACTTCTTCTCTATGTACAAATACGCTCTTGATGCACTTCTAATCAATGAGTACTCTTGCTTAGCTACAAGGTGTTTTATATGGTACCAAGAGAATCAAGAGTGCATGGTCACTGGAGGTGACGTGCTACAGAAGAGAGGGCTCCACGAGAGTGAAAGATGGACCAACGTGTACTTCTTGATTGGGTTCTTTGTGTTTTATCGTGTGCTCTGCTTCTTGGTTTTAATTAGAAGAGTTTCAAGATCCAAAACTTGA 1806 0.4109 MADQSPQLSPKTYKLTATSISYTKSTSTNSTFAFAPFFLFKHCTSTPPTYILKDVSLTAYPSEILAIVGPSGAGKSTLLDILSARTLPSNGSLSLNSSPLNPSSYRKLSAYVPQHDACLPLLTVSETFAFSARLLKPKTCDIVTIVSSLLTELRLTHLANTRLAHGLSGGEHRRVSIGLSLLHDPAVLLLDEPTSGLDSTSAFKVMQILKSTCVSRNRTIILSIHQPSFKILSCIDRILLLSKGTVVHQGSIASLQAFLHSKGFTVPHQLNALEYAMEILNQLNEVKPITLPSLPESPESSTSSLMSDNETTTTKEIRYKSSRIHEICTLYSRFWKIIYRTRKLLLTNTAEALIVGLVLGTIYINIGFDKEGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSYLIANTLVFLPYLLVVAIIYSIPVYFLVGLCASWLSFAYFVLVIWVIVLMANSFVLFLSSLAPNYIAGTSLLTVLLAAFFLFSGYFISKDSLPKYWLFMYFFSMYKYALDALLINEYSCLATRCFIWYQENQECMVTGGDVLQKRGLHESERWTNVYFLIGFFVFYRVLCFLVLIRRVSRSKT. 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07333 601 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 12 586 - -
Seca8g07333 601 FunFam ATP-binding cassette transporter 41 261 - -
Seca8g07333 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 259 IPR027417 -
Seca8g07333 601 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 268 IPR003439 GO:0005524
Seca8g07333 601 Gene3D - 40 264 IPR027417 -
Seca8g07333 601 SMART AAA_5 61 245 IPR003593 GO:0016887
Seca8g07333 601 Pfam ABC transporter 52 195 IPR003439 GO:0005524
Seca8g07333 601 Pfam ABC-2 type transporter 225 285 IPR043926 GO:0140359
Seca8g07333 601 Pfam ABC-2 type transporter 326 535 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07333 Seca-Chr8 170054510 170056315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07333 45 263 Calmodulin-binding Proteins AT2G36910 28.879 1.05e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07333 K05681 - gmx:100790712 928.317