Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07313 ATGGAGTTTAATACGATAGAAGAAGCTATGAGGTTTTGGACAGATTATGGTGGAATGATTGGTTTTGATGTTAGGCAATTGTATGCAAATAAAAGCCGTGTAGATAAGTGTGTTAATACGGTAAGGTTTGTATGTGCAAAGGAAAGCTTTAGAAGACTTGACAAGCGAGATTTTCTGACAAAATCTCCCCGAGCAGAAACAAGAACAGGTTGTGGAGTAAGAATGGGTATAAAGTTAGTTCGAGAAACAGGAAAGTTTGTAATTTATGAATTTGAAGGTAATCACAATCATATTCTGCAGACTCCAGAAACTAGTCACATGATGTCATCGCAAAGAAAGATCTCAAAAGTACAAGGGATGCAAATAGATTTAGCTGATGATTCTGGTATAAGACCAAAAGCAACCCTTGACTTAATGAGTAAACAAGCAGGTGGTAAAGATGTCATTGGATTTACAAAGCAAGACCAAAAGAACTATCTTCGTGATAAGAGAAAGAGAGAGTTGGCATATGGGGAAGCCGGCAGCTTACTAAGGTACTTTCGTGACCAATTATCTAATAATCCATCTTTTCATTATGTTGTGCAGTTAGATAGTGAGGAACAAATCACAAACATTTTTTGGACTGATGCAAGAACGATTATTGATTACGCTATTTTTGGTGATTCCATAACCTTTGACACTACATGTTGCACAAACAAGGAATGTAGGCCACTTGGTGTTTTTGCTGGATTCAATCATCATTGA 744 0.3683 MEFNTIEEAMRFWTDYGGMIGFDVRQLYANKSRVDKCVNTVRFVCAKESFRRLDKRDFLTKSPRAETRTGCGVRMGIKLVRETGKFVIYEFEGNHNHILQTPETSHMMSSQRKISKVQGMQIDLADDSGIRPKATLDLMSKQAGGKDVIGFTKQDQKNYLRDKRKRELAYGEAGSLLRYFRDQLSNNPSFHYVVQLDSEEQITNIFWTDARTIIDYAIFGDSITFDTTCCTNKECRPLGVFAGFNHH. 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07313 247 PANTHER OS01G0519700 PROTEIN 1 228 - -
Seca8g07313 247 Pfam FAR1 DNA-binding domain 11 100 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07313 Seca-Chr8 169784473 169785216 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g07313 FAR1 2.4e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07313 - - aip:107620925 363.999