Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g07304 | ATGCCTTTGCTGCTCCTATGGATCCATTTCTTTCTCTTCACCAACCTCATTTTCCCTTCACTTTCTGTCCCTTTCTTGCCTTCAGAAAATGTCACACTCTTTGGCGACGCCTTCTACAGTGACAACGCCATTAGTCTCACCAAGGAACTCCCTTGCCTTTCTTCTCATTCTTCTCCTTCTTCTGGGATGGGAAGGGCTTTCTACGTATACCCAGTTCGCTTTCTTGATCCTTTGACAAACTCCACTGCTTCTTTCTCTTGCCGTTTCTCTTTCTCAATCTTTCCCTCACCTTCTTGCCCTTCTGGGGATGGCATTGCTTTTCTCATAGCCTCAAGCACCGATTTTTCAAGCCTCTCTCGTGGATACATGGGTCTTCCTGCACCTCTTCTTTTCAATCAACAAGATTCCTACTTTGCAGTGGAATTTGACACCAGTTTTGACCCTTCTCTTGGTGACATTAATGGGAACCACATTGGCATTGATGTCAATAGTGTCGTATCTTTGGCTTCTGTGGATGTTCTTTCTCGTGGAATTGACTTGAAAAGTGGGAAATTGATCACTGCTTGGATTGAATACAGAGATTCCATGAAAATGGTTCGTGTGTGGGTTGGTTACTCTTCAACTAGACCTCCATCTCCAATTCTTGTTTCCCAGATAGACCTTTCTGAGAAACTCAAGGAGTTCATGCATGTGGGGTTCTCTGCCTCTAATGGACAGGGCTCAGGTATCTACTTTGTTCATCATTGGCAATTCAAAACTTTGGGTGATTCTCCTTCATTGAGTCCTATGGATATGGTAGAAGAAGGGGACTGCTTCTTGTGTTATGCAGGGGATTCAATCACATCCACCAAACACAATGGTGCAAATAACAGAAGGAAAAAGATTGAGGAGTTGGCTCTTGGATTGGGAGGGATAACAGCTTTTGTAGTGTCAGCATTGGCAGCAGTTTTTGTGATCTGTGTTTTCTTGACAAAGAAAAAGGGTGTTGTTAGACAGAAAAAGGAAGGTCAAAATTGTAGATTTCAGACAAATAAAGTGCCTATGAGATTGACACTTTCGGAGATCAAAGTGGCCACAATGGGGTTTAATAGAGATAGACTTGTTGGGGAAGGTGCATCAGCTAAGGTTTATAAAGGGTCTCTTCCATTTGGTGGTGATGTGGCAGTGAAAAGATTTGAGAGAGCTGATGATTTAGATTGTCTACACAATCCATTCGCCACTGAGTTTGCTACAATGGTGGGTTATTTGAAGCACAAAAACTTGGTTCAGCTTAAGGGATGGTGTTGTGAGGGGAATGAGTTGGTACTGGTTTATGAGTACCTACCCAATGGGAGCTTGGATAAAGTTCTGCATAGAAACTTCAATTCTTCAATTGTTCTTTCATGGAAGCAAAGAGTTAATATAGTTCTAGGGGTTGCTTCTGCTCTTACCTATCTTCATGAAGAATGTGAGAGGCAGATCATTCATAGAGATGTTAAGACTTGCAATATAATGCTTGATGCAGATTTCAATGCCAAGCTTGGGGATTTTGGACTTGCAGAAGTGTATGAACATAGTTCTATCACAAGGGATGCTACTATACCAGCAGGGACAATGGGTTATCTTGCTCCTGAATATGTGTATACTGGTGTTCCTACTGTAAAAACTGATGTGTATAGCTTTGGGGTAGTGATGATAGAAGTGGCAACTGGGAGGAAGCCTGTGGAAGATGATGGCACTGTGGTTGGTGATTATGTGTGGAACTTGTGGGAAAAGAACAAACTCATTGAGGCTGCTGATCCAAGATTGATGGGGAAGTTTGATGCATTGGAGATGGAAAGGATGCTTCTGGTGGGGCTTCTTTGTGTACACCCTGACCATGAAAAGAGGCCAAGAGTGAGAGATGCAGCTAGAATGATTAAGAAAGAAGCAACACTTCCACTGTTACCTCCTAGTAAACCAAGGGTGAGAATTAGGCCTATTTGTCCAAATGATACACCAGAAACACAAACTGTTGTTGGGGATTGGCTCAGTTCAGAGGAGGCTCCTTATTTGACTCCTAGGAGCCAGTTTTATTAG | 2058 | 0.4271 | MPLLLLWIHFFLFTNLIFPSLSVPFLPSENVTLFGDAFYSDNAISLTKELPCLSSHSSPSSGMGRAFYVYPVRFLDPLTNSTASFSCRFSFSIFPSPSCPSGDGIAFLIASSTDFSSLSRGYMGLPAPLLFNQQDSYFAVEFDTSFDPSLGDINGNHIGIDVNSVVSLASVDVLSRGIDLKSGKLITAWIEYRDSMKMVRVWVGYSSTRPPSPILVSQIDLSEKLKEFMHVGFSASNGQGSGIYFVHHWQFKTLGDSPSLSPMDMVEEGDCFLCYAGDSITSTKHNGANNRRKKIEELALGLGGITAFVVSALAAVFVICVFLTKKKGVVRQKKEGQNCRFQTNKVPMRLTLSEIKVATMGFNRDRLVGEGASAKVYKGSLPFGGDVAVKRFERADDLDCLHNPFATEFATMVGYLKHKNLVQLKGWCCEGNELVLVYEYLPNGSLDKVLHRNFNSSIVLSWKQRVNIVLGVASALTYLHEECERQIIHRDVKTCNIMLDADFNAKLGDFGLAEVYEHSSITRDATIPAGTMGYLAPEYVYTGVPTVKTDVYSFGVVMIEVATGRKPVEDDGTVVGDYVWNLWEKNKLIEAADPRLMGKFDALEMERMLLVGLLCVHPDHEKRPRVRDAARMIKKEATLPLLPPSKPRVRIRPICPNDTPETQTVVGDWLSSEEAPYLTPRSQFY. | 686 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g07304 | 685 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 487 | 499 | IPR008271 | GO:0004672|GO:0006468 | |
Seca8g07304 | 685 | Pfam | Legume lectin domain | 27 | 259 | IPR001220 | GO:0030246 | |
Seca8g07304 | 685 | FunFam | L-type lectin-domain containing receptor kinase S.6 | 15 | 267 | - | - | |
Seca8g07304 | 685 | Gene3D | Transferase(Phosphotransferase) domain 1 | 441 | 639 | - | - | |
Seca8g07304 | 685 | Gene3D | - | 17 | 264 | - | - | |
Seca8g07304 | 685 | SMART | serkin_6 | 362 | 642 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g07304 | 685 | CDD | lectin_legume_LecRK_Arcelin_ConA | 14 | 253 | IPR001220 | GO:0030246 | |
Seca8g07304 | 685 | FunFam | L-type lectin-domain containing receptor kinase S.6 | 325 | 440 | - | - | |
Seca8g07304 | 685 | ProSitePatterns | Protein kinases ATP-binding region signature. | 368 | 390 | IPR017441 | GO:0005524 | |
Seca8g07304 | 685 | FunFam | L-type lectin-domain containing receptor kinase VIII.1 | 441 | 651 | - | - | |
Seca8g07304 | 685 | ProSiteProfiles | Protein kinase domain profile. | 362 | 642 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g07304 | 685 | SUPERFAMILY | Protein kinase-like (PK-like) | 346 | 650 | IPR011009 | - | |
Seca8g07304 | 685 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 26 | 261 | IPR013320 | - | |
Seca8g07304 | 685 | Pfam | Protein kinase domain | 363 | 573 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g07304 | 685 | PANTHER | - | 48 | 644 | - | - | |
Seca8g07304 | 685 | Gene3D | Phosphorylase Kinase; domain 1 | 323 | 440 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g07304 | Seca-Chr8 | 169693620 | 169701515 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g07304 | 5 | 684 | Receptor kinase-like Gene Family | AT5G42120 | 55.777 | 0.0 | 741 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Seca8g07304 | Pkinase | 1e-41 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g07304 | - | - | lang:109346768 | 996.112 |