Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07304 ATGCCTTTGCTGCTCCTATGGATCCATTTCTTTCTCTTCACCAACCTCATTTTCCCTTCACTTTCTGTCCCTTTCTTGCCTTCAGAAAATGTCACACTCTTTGGCGACGCCTTCTACAGTGACAACGCCATTAGTCTCACCAAGGAACTCCCTTGCCTTTCTTCTCATTCTTCTCCTTCTTCTGGGATGGGAAGGGCTTTCTACGTATACCCAGTTCGCTTTCTTGATCCTTTGACAAACTCCACTGCTTCTTTCTCTTGCCGTTTCTCTTTCTCAATCTTTCCCTCACCTTCTTGCCCTTCTGGGGATGGCATTGCTTTTCTCATAGCCTCAAGCACCGATTTTTCAAGCCTCTCTCGTGGATACATGGGTCTTCCTGCACCTCTTCTTTTCAATCAACAAGATTCCTACTTTGCAGTGGAATTTGACACCAGTTTTGACCCTTCTCTTGGTGACATTAATGGGAACCACATTGGCATTGATGTCAATAGTGTCGTATCTTTGGCTTCTGTGGATGTTCTTTCTCGTGGAATTGACTTGAAAAGTGGGAAATTGATCACTGCTTGGATTGAATACAGAGATTCCATGAAAATGGTTCGTGTGTGGGTTGGTTACTCTTCAACTAGACCTCCATCTCCAATTCTTGTTTCCCAGATAGACCTTTCTGAGAAACTCAAGGAGTTCATGCATGTGGGGTTCTCTGCCTCTAATGGACAGGGCTCAGGTATCTACTTTGTTCATCATTGGCAATTCAAAACTTTGGGTGATTCTCCTTCATTGAGTCCTATGGATATGGTAGAAGAAGGGGACTGCTTCTTGTGTTATGCAGGGGATTCAATCACATCCACCAAACACAATGGTGCAAATAACAGAAGGAAAAAGATTGAGGAGTTGGCTCTTGGATTGGGAGGGATAACAGCTTTTGTAGTGTCAGCATTGGCAGCAGTTTTTGTGATCTGTGTTTTCTTGACAAAGAAAAAGGGTGTTGTTAGACAGAAAAAGGAAGGTCAAAATTGTAGATTTCAGACAAATAAAGTGCCTATGAGATTGACACTTTCGGAGATCAAAGTGGCCACAATGGGGTTTAATAGAGATAGACTTGTTGGGGAAGGTGCATCAGCTAAGGTTTATAAAGGGTCTCTTCCATTTGGTGGTGATGTGGCAGTGAAAAGATTTGAGAGAGCTGATGATTTAGATTGTCTACACAATCCATTCGCCACTGAGTTTGCTACAATGGTGGGTTATTTGAAGCACAAAAACTTGGTTCAGCTTAAGGGATGGTGTTGTGAGGGGAATGAGTTGGTACTGGTTTATGAGTACCTACCCAATGGGAGCTTGGATAAAGTTCTGCATAGAAACTTCAATTCTTCAATTGTTCTTTCATGGAAGCAAAGAGTTAATATAGTTCTAGGGGTTGCTTCTGCTCTTACCTATCTTCATGAAGAATGTGAGAGGCAGATCATTCATAGAGATGTTAAGACTTGCAATATAATGCTTGATGCAGATTTCAATGCCAAGCTTGGGGATTTTGGACTTGCAGAAGTGTATGAACATAGTTCTATCACAAGGGATGCTACTATACCAGCAGGGACAATGGGTTATCTTGCTCCTGAATATGTGTATACTGGTGTTCCTACTGTAAAAACTGATGTGTATAGCTTTGGGGTAGTGATGATAGAAGTGGCAACTGGGAGGAAGCCTGTGGAAGATGATGGCACTGTGGTTGGTGATTATGTGTGGAACTTGTGGGAAAAGAACAAACTCATTGAGGCTGCTGATCCAAGATTGATGGGGAAGTTTGATGCATTGGAGATGGAAAGGATGCTTCTGGTGGGGCTTCTTTGTGTACACCCTGACCATGAAAAGAGGCCAAGAGTGAGAGATGCAGCTAGAATGATTAAGAAAGAAGCAACACTTCCACTGTTACCTCCTAGTAAACCAAGGGTGAGAATTAGGCCTATTTGTCCAAATGATACACCAGAAACACAAACTGTTGTTGGGGATTGGCTCAGTTCAGAGGAGGCTCCTTATTTGACTCCTAGGAGCCAGTTTTATTAG 2058 0.4271 MPLLLLWIHFFLFTNLIFPSLSVPFLPSENVTLFGDAFYSDNAISLTKELPCLSSHSSPSSGMGRAFYVYPVRFLDPLTNSTASFSCRFSFSIFPSPSCPSGDGIAFLIASSTDFSSLSRGYMGLPAPLLFNQQDSYFAVEFDTSFDPSLGDINGNHIGIDVNSVVSLASVDVLSRGIDLKSGKLITAWIEYRDSMKMVRVWVGYSSTRPPSPILVSQIDLSEKLKEFMHVGFSASNGQGSGIYFVHHWQFKTLGDSPSLSPMDMVEEGDCFLCYAGDSITSTKHNGANNRRKKIEELALGLGGITAFVVSALAAVFVICVFLTKKKGVVRQKKEGQNCRFQTNKVPMRLTLSEIKVATMGFNRDRLVGEGASAKVYKGSLPFGGDVAVKRFERADDLDCLHNPFATEFATMVGYLKHKNLVQLKGWCCEGNELVLVYEYLPNGSLDKVLHRNFNSSIVLSWKQRVNIVLGVASALTYLHEECERQIIHRDVKTCNIMLDADFNAKLGDFGLAEVYEHSSITRDATIPAGTMGYLAPEYVYTGVPTVKTDVYSFGVVMIEVATGRKPVEDDGTVVGDYVWNLWEKNKLIEAADPRLMGKFDALEMERMLLVGLLCVHPDHEKRPRVRDAARMIKKEATLPLLPPSKPRVRIRPICPNDTPETQTVVGDWLSSEEAPYLTPRSQFY. 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07304 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Seca8g07304 685 Pfam Legume lectin domain 27 259 IPR001220 GO:0030246
Seca8g07304 685 FunFam L-type lectin-domain containing receptor kinase S.6 15 267 - -
Seca8g07304 685 Gene3D Transferase(Phosphotransferase) domain 1 441 639 - -
Seca8g07304 685 Gene3D - 17 264 - -
Seca8g07304 685 SMART serkin_6 362 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07304 685 CDD lectin_legume_LecRK_Arcelin_ConA 14 253 IPR001220 GO:0030246
Seca8g07304 685 FunFam L-type lectin-domain containing receptor kinase S.6 325 440 - -
Seca8g07304 685 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Seca8g07304 685 FunFam L-type lectin-domain containing receptor kinase VIII.1 441 651 - -
Seca8g07304 685 ProSiteProfiles Protein kinase domain profile. 362 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07304 685 SUPERFAMILY Protein kinase-like (PK-like) 346 650 IPR011009 -
Seca8g07304 685 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 261 IPR013320 -
Seca8g07304 685 Pfam Protein kinase domain 363 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07304 685 PANTHER - 48 644 - -
Seca8g07304 685 Gene3D Phosphorylase Kinase; domain 1 323 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07304 Seca-Chr8 169693620 169701515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07304 5 684 Receptor kinase-like Gene Family AT5G42120 55.777 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca8g07304 Pkinase 1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07304 - - lang:109346768 996.112