Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07303 ATGGCAGATCTTGTTAGCTACAGGAATGCCGACCGTGACATCGAGCAGGCATTGATTGCTTTGAAAAAGGGTGCTCAGCTGCTTAAATATGGTCGTAAGGGAAAGCCTAAGTTTTGTTCATTTAGACTTTCCAATGATGAATTGTCTTTAATCTGGATTTCAAGTAGTGGAGAAAGAAGTTTGAAGCTATCTTCTGTCTCAAGAATTATTCCTGGACAAAGAACTGCTGTTTTCCAACGATATCTGCGTCCTGAGAAGGACTATTTGTCTTTTTCACTTATTTATAACCACGGGAAGCGATCTCTTGATTTGATTTGCAAGGATAAAGTTGAGGCAGAAGTGTGGATTGCTGGTCTCAAGGCATTGATATCTTCTGGTCAAGGTGGGCGGTCAAAAATTGATGGATGGAGTGATGGAGGCCTATATCTTGATGATAGTAGAGACTTGACATCAAGTAGTCCTAGTGAAAGTTCAGTTAGTGTTTCACAGGACATCAGTTCTCCTGACATTTCTCTTAGTGTGCCAAATACTTCTCCAAAGTCCTTTCAGCCTGAGAATACCTTAAATTTTGAACGCTCACATGCTCCATCAAACCCATCAAATATGCAAGTGAAAGGATCTGGTTCAGATGTTTTTCGTGTTAGTGTTTCAAGTGCCCCCAGCACATCCAGTCATGGGTCTGCACCGGATGATTATGATGCTCTTGGTGACGTATACATTTGGGGGGAGGTCATCTGTGAGAATGTTGTGAAAGTTGGTGCTGAGAAAAATGTCAGTTATCTCAGCCCAAGGGCAGATATTCTCCTCCCCAGGCCACTGGAGTCCAATGTGGTCTTAGATGTACTTCAAATAGCATGCGGTGTAAAACATGCTGCTCTAGTTACAAGGCAAGGTGAAATTTTTACATGGGGTGAAGAATCTGGTGGGCGTCTTGGCCATGGTGTTGGGAAGAATGTGGTTCAACCTCGTCTAGTTGAGGCACTGTCTTCTACAACCGTTGATTTTGTTGCCTGTGGGGAGTTTCATACATGTGCTGTTACAATGGCTGGGGAACTATATACATGGGGTGATGGTACTCATAATGCTGGGCTTCTTGGTCATGGTACAGATGTTAGTCACTGGATACCAAAGCGAATTGCAGGTCCACTAGAGGGGCTTCAAGTCGCTTTAGTCACCTGTGGTCCATGGCACACAGCTTTGATAACTTCAACTGGGCAGCTCTTTACATTTGGTGATGGAACATTTGGTGTCCTAGGCCATGGGGATAGGGAAAATGTTTCATATCCTAGAGAAGTAGAATCCCTATCTGGGTTGAGGACAATAGCTGTTGCATGTGGAGTGTGGCATACTGCAGCTGTCGTAGAGGTTATTGTGACACAATCCAGTGCAAGTGTGTCATCAGGTAAATTGTTTACTTGGGGTGATGGAGATAAAAATCGCCTTGGACATGGAGACAAAGAGGCCCGGCTCGAACCAACTTGCGTACCTTCACTTATTGATTACAATTTTCATAGAATTGCTTGCGGGCACAGTTTGACAGTAGGCCTGACAACATCTGGACATGTTTTTACAATGGGAAGCACTGTTTATGGTCAGCTTGGAAATCCCCAGTCTGACGGAAAGGTGCCCTGTTTGGTTGAAGACAAGCTTGCTGGAGATTCTGTTGAAGAAATTGCATGTGGAGCTTATCATGTTGCTGTTTTAACATCCAAAAATGAAGTTTATACGTGGGGGAAGGGTGCAAATGGGCGATTGGGTCATGGAGATGTTGAAGATAGGAAAACACCTACTTTGGTTGAAGCCTTGAAGGATAGACATGTGAAATATATTGCATGTGGTTCAAACTACTCTGCTGCCATATGCCTTCATAAGTGGCAATCTGGTGCTGAGCAGTCTCAATGCTCTGCTTGTAGACAGGCATTTGGGTTCACTAGAAAGAGGCACAACTGTTATAATTGTGGACTTGTGCATTGTCATTCATGCAGTTCAAGGAAAGCATTGAGAGCAGCTCTGGCTCCAAATCCTGGGAAGCCATATCGTGTTTGTGATTCTTGTTATGCAAAATTGAATAAGGTTACAGAATCTGGCAATAATAATCGGAGGAATGCTATGCCTCGTTTGTCTGGTGAAAACAAGGACAGATTAGAAAAGTCTGAGCTAAGATTGTCGAAGTCAGCAGTGCCTTCTAATATGGATTTGATAAAGCAGCTAGATAGTAAGGCAGCCAAACAGGGGAAGAAGGCTGATACATTCTCTCTGGTTCGCGCCTCACAAGCGCCGTCTTTGCTACAGCTGAAAGATGTTGTCTTGTCTACTGCTATTGATCTGAAACGCACAGTTCCTAGACCTGTTCTTACACAATCTGGAGTGAGTTCCAGGTCTGTGTCCCCTTTCTCTAGAAGACCGAGTCCCCCTCGTTCTGCTACACCTATTCCAACAACATCAGGACTTTCCTTCTCAAAAAGTATTGCTGATAGTTTGAAGAAAACAAATGAACTATTGAACCAAGAAGTGCTGAAGTTACGTGGTCAGAGATGTGAACTGCAAGAATTAGAGCTTCAAAGGTCAGCAAAAAAGACCCAGGAAGCTATGGCACTGGCTGCTGAGGAATCTACCAAATCTAAGGCTGCAAAAGAAGTTATTAAGTCACTTACAGCACAGCTCAAAGATCTAGCTGAGAGGCTTCCTCCTGGTGTTTATGATGCTGAGAACATCAGACCAGTGTACCTGCCAAATGGTCTGGAGCCAAATGGCATCCACTATCCAGAGTTAAATGGGGAGCGTCACACCAGGGCTGAGTCAATCAGTGGCTCTAGTTTGGCTTCCATAGGTCTTGAATCTTCTCTGATGAATAGAACAGAAGGGAATTTCCCTGGAAGCTATGGAACTAGTCTTTACCAGCAAAGCCGGGGGCTTGTGGCCTCTAATGGGACAGATGATTACCCAGATGCTAAATTGCCAAATGGAAGTGGTGTGATTCAGGCAAGCAGCAACACGATCGCAGAGGGTGGTGGAGTTTCGGTGAATCTCTCACATGGAATGGCAGATCTTGTTAGCTACAGGAATGCCGACCGTGACATCGAGCAGGCATTGATTGCTTTGAAAAAGGGTGCTCAGCTGCTTAAATATGGTCGTAAGGGAAAGCCTAAGTTTTGTTCATTTAGACTTTCCAATGATGAATTGTCTTTAATCTGGATTTCAAGTAGTGGAGAAAGAAGTTTGAAGCTATCTTCTGTCTCAAGAATTATTCCTGGACAAAGAACTGCTGTTTTCCAACGATATCTGCGTCCTGAGAAGGACTATTTGTCTTTTTCACTTATTTATAACCACGGGAAGCGATCTCTTGATTTGATTTGCAAGGATAAAGTTGAGGCAGAAGTGTGGATTGCTGGTCTCAAGGCATTGATATCTTCTGGTCAAGGTGGGCGGTCAAAAATTGATGGATGGAGTGATGGAGGCCTATATCTTGATGATAGTAGAGACTTGACATCAAGTAGTCCTAGTGAAAGTTCAGTTAGTGTTTCACAGGACATCAGTTCTCCTGACATTTCTCTTAGTGTGCCAAATACTTCTCCAAAGTCCTTTCAGCCTGAGAATACCTTAAATTTTGAACGCTCACATGCTCCATCAAACCCATCAAATATGCAAGTGAAAGGATCTGGTTCAGATGTTTTTCGTGTTAGTGTTTCAAGTGCCCCCAGCACATCCAGTCATGGGTCTGCACCGGATGATTATGATGCTCTTGGTGACGTATACATTTGGGGGGAGGTCATCTGTGAGAATGTTGTGAAAGTTGGTGCTGAGAAAAATGTCAGTTATCTCAGCCCAAGGGCAGATATTCTCCTCCCCAGGCCACTGGAGTCCAATGTGGTCTTAGATGTACTTCAAATAGCATGCGGTGTAAAACATGCTGCTCTAGTTACAAGGCAAGGTGAAATTTTTACATGGGGTGAAGAATCTGGTGGGCGTCTTGGCCATGGTGTTGGGAAGAATGTGGTTCAACCTCGTCTAGTTGAGGCACTGTCTTCTACAACCGTTGATTTTGTTGCCTGTGGGGAGTTTCATACATGTGCTGTTACAATGGCTGGGGAACTATATACATGGGGTGATGGTACTCATAATGCTGGGCTTCTTGGTCATGGTACAGATGTTAGTCACTGGATACCAAAGCGAATTGCAGGTCCACTAGAGGGGCTTCAAGTCGCTTTAGTCACCTGTGGTCCATGGCACACAGCTTTGATAACTTCAACTGGGCAGCTCTTTACATTTGGTGATGGAACATTTGGTGTCCTAGGCCATGGGGATAGGGAAAATGTTTCATATCCTAGAGAAGTAGAATCCCTATCTGGGTTGAGGACAATAGCTGTTGCATGTGGAGTGTGGCATACTGCAGCTGTCGTAGAGGTTATTGTGACACAATCCAGTGCAAGTGTGTCATCAGGTAAATTGTTTACTTGGGGTGATGGAGATAAAAATCGCCTTGGACATGGAGACAAAGAGGCCCGGCTCGAACCAACTTGCGTACCTTCACTTATTGATTACAATTTTCATAGAATTGCTTGCGGGCACAGTTTGACAGTAGGCCTGACAACATCTGGACATGTTTTTACAATGGGAAGCACTGTTTATGGTCAGCTTGGAAATCCCCAGTCTGACGGAAAGGTGCCCTGTTTGGTTGAAGACAAGCTTGCTGGAGATTCTGTTGAAGAAATTGCATGTGGAGCTTATCATGTTGCTGTTTTAACATCCAAAAATGAAGTTTATACGTGGGGGAAGGGTGCAAATGGGCGATTGGGTCATGGAGATGTTGAAGATAGGAAAACACCTACTTTGGTTGAAGCCTTGAAGGATAGACATGTGAAATATATTGCATGTGGTTCAAACTACTCTGCTGCCATATGCCTTCATAAGTGGCAATCTGGTGCTGAGCAGTCTCAATGCTCTGCTTGTAGACAGGCATTTGGGTTCACTAGAAAGAGGCACAACTGTTATAATTGTGGACTTGTGCATTGTCATTCATGCAGTTCAAGGAAAGCATTGAGAGCAGCTCTGGCTCCAAATCCTGGGAAGCCATATCGTGTTTGTGATTCTTGTTATGCAAAATTGAATAAGGTTACAGAATCTGGCAATAATAATCGGAGGAATGCTATGCCTCGTTTGTCTGGTGAAAACAAGGACAGATTAGAAAAGTCTGAGCTAAGATTGTCGAAGTCAGCAGTGCCTTCTAATATGGATTTGATAAAGCAGCTAGATAGTAAGGCAGCCAAACAGGGGAAGAAGGCTGATACATTCTCTCTGGTTCGCGCCTCACAAGCGCCGTCTTTGCTACAGCTGAAAGATGTTGTCTTGTCTACTGCTATTGATCTGAAACGCACAGTTCCTAGACCTGTTCTTACACAATCTGGAGTGAGTTCCAGGTCTGTGTCCCCTTTCTCTAGAAGACCGAGTCCCCCTCGTTCTGCTACACCTATTCCAACAACATCAGGACTTTCCTTCTCAAAAAGTATTGCTGATAGTTTGAAGAAAACAAATGAACTATTGAACCAAGAAGTGCTGAAGTTACGTGGTCAGAGATGTGAACTGCAAGAATTAGAGCTTCAAAGGTCAGCAAAAAAGACCCAGGAAGCTATGGCACTGGCTGCTGAGGAATCTACCAAATCTAAGGCTGCAAAAGAAGTTATTAAGTCACTTACAGCACAGCTCAAAGATCTAGCTGAGAGGCTTCCTCCTGGTGTTTATGATGCTGAGAACATCAGACCAGTGTACCTGCCAAATGGTCTGGAGCCAAATGGCATCCACTATCCAGAGTTAAATGGGGAGCGTCACACCAGGGCTGAGTCAATCAGTGGCTCTAGTTTGGCTTCCATAGGTCTTGAATCTTCTCTGATGAATAGAACAGAAGGGAATTTCCCTGGAAGCTATGGAACTAGTCTTTACCAGCAAAGCCGGGGGCTTGTGGCCTCTAATGGGACAGATGATTACCCAGATGCTAAATTGCCAAATGGAAGTGGTGTGATTCAGGCAAGCAGCAACAGTGTGTCAGATACTGCTGAGGGTAGGGATTCTGGGCATTTCCAAGATGATGAGAATGATTTGAGATCGAGGAATGCTGCATTGCCTGCTAATAGTAATCAAATTGAAGCAGAATGGATCGAACAGTATGAACCTGGTGTCTATATAACACTTGTTGCCCTGCGAGATGGAACGAGAGATCTAAAGAGAGTGCGCTTCAGCCGGAGAAGATTTGGAGAGCACCAAGCAGAGACATGGTGGTCAGAGAACCGCGAGAAGGTATATGAAAGGTACAATGTTCGGAGCACAGACAAGTCTTCAAACCAAGCAGCACGTAGGGCAGAGGGTGCTGGTTCACCTGTTCTATAA 6381 0.4435 MADLVSYRNADRDIEQALIALKKGAQLLKYGRKGKPKFCSFRLSNDELSLIWISSSGERSLKLSSVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYNHGKRSLDLICKDKVEAEVWIAGLKALISSGQGGRSKIDGWSDGGLYLDDSRDLTSSSPSESSVSVSQDISSPDISLSVPNTSPKSFQPENTLNFERSHAPSNPSNMQVKGSGSDVFRVSVSSAPSTSSHGSAPDDYDALGDVYIWGEVICENVVKVGAEKNVSYLSPRADILLPRPLESNVVLDVLQIACGVKHAALVTRQGEIFTWGEESGGRLGHGVGKNVVQPRLVEALSSTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEARLEPTCVPSLIDYNFHRIACGHSLTVGLTTSGHVFTMGSTVYGQLGNPQSDGKVPCLVEDKLAGDSVEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAICLHKWQSGAEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDSCYAKLNKVTESGNNNRRNAMPRLSGENKDRLEKSELRLSKSAVPSNMDLIKQLDSKAAKQGKKADTFSLVRASQAPSLLQLKDVVLSTAIDLKRTVPRPVLTQSGVSSRSVSPFSRRPSPPRSATPIPTTSGLSFSKSIADSLKKTNELLNQEVLKLRGQRCELQELELQRSAKKTQEAMALAAEESTKSKAAKEVIKSLTAQLKDLAERLPPGVYDAENIRPVYLPNGLEPNGIHYPELNGERHTRAESISGSSLASIGLESSLMNRTEGNFPGSYGTSLYQQSRGLVASNGTDDYPDAKLPNGSGVIQASSNTIAEGGGVSVNLSHGMADLVSYRNADRDIEQALIALKKGAQLLKYGRKGKPKFCSFRLSNDELSLIWISSSGERSLKLSSVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYNHGKRSLDLICKDKVEAEVWIAGLKALISSGQGGRSKIDGWSDGGLYLDDSRDLTSSSPSESSVSVSQDISSPDISLSVPNTSPKSFQPENTLNFERSHAPSNPSNMQVKGSGSDVFRVSVSSAPSTSSHGSAPDDYDALGDVYIWGEVICENVVKVGAEKNVSYLSPRADILLPRPLESNVVLDVLQIACGVKHAALVTRQGEIFTWGEESGGRLGHGVGKNVVQPRLVEALSSTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEARLEPTCVPSLIDYNFHRIACGHSLTVGLTTSGHVFTMGSTVYGQLGNPQSDGKVPCLVEDKLAGDSVEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAICLHKWQSGAEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDSCYAKLNKVTESGNNNRRNAMPRLSGENKDRLEKSELRLSKSAVPSNMDLIKQLDSKAAKQGKKADTFSLVRASQAPSLLQLKDVVLSTAIDLKRTVPRPVLTQSGVSSRSVSPFSRRPSPPRSATPIPTTSGLSFSKSIADSLKKTNELLNQEVLKLRGQRCELQELELQRSAKKTQEAMALAAEESTKSKAAKEVIKSLTAQLKDLAERLPPGVYDAENIRPVYLPNGLEPNGIHYPELNGERHTRAESISGSSLASIGLESSLMNRTEGNFPGSYGTSLYQQSRGLVASNGTDDYPDAKLPNGSGVIQASSNSVSDTAEGRDSGHFQDDENDLRSRNAALPANSNQIEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWWSENREKVYERYNVRSTDKSSNQAARRAEGAGSPVL. 2127
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07303 2126 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 1456 1466 IPR000408 -
Seca8g07303 2126 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 1418 1469 IPR000408 -
Seca8g07303 2126 Coils Coil 1887 1907 - -
Seca8g07303 2126 Coils Coil 824 861 - -
Seca8g07303 2126 MobiDBLite consensus disorder prediction 1986 2031 - -
Seca8g07303 2126 SUPERFAMILY RCC1/BLIP-II 235 625 IPR009091 -
Seca8g07303 2126 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 572 623 IPR000408 -
Seca8g07303 2126 FunFam Putative E3 ubiquitin-protein ligase HERC1 1643 1711 - -
Seca8g07303 2126 SMART fyve_4 622 691 IPR000306 GO:0046872
Seca8g07303 2126 SMART fyve_4 1635 1704 IPR000306 GO:0046872
Seca8g07303 2126 Gene3D - 1474 1647 IPR009091 -
Seca8g07303 2126 Gene3D - 461 634 IPR009091 -
Seca8g07303 2126 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 1071 1902 - -
Seca8g07303 2126 FunFam PH, RCC1 and FYVE domains-containing protein 1 207 457 - -
Seca8g07303 2126 Pfam Pleckstrin homology domain 1028 1136 IPR001849 -
Seca8g07303 2126 Pfam Pleckstrin homology domain 15 123 IPR001849 -
Seca8g07303 2126 SUPERFAMILY FYVE/PHD zinc finger 624 698 IPR011011 -
Seca8g07303 2126 FunFam PH, RCC1 and FYVE domains-containing protein 1 458 629 - -
Seca8g07303 2126 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 1481 1532 IPR000408 -
Seca8g07303 2126 Pfam Transcription factor BRX N-terminal domain 1882 1917 IPR027988 -
Seca8g07303 2126 Pfam Transcription factor BRX N-terminal domain 869 904 IPR027988 -
Seca8g07303 2126 FunFam PH, RCC1 and FYVE domains-containing protein 1 1471 1642 - -
Seca8g07303 2126 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 350 404 IPR000408 -
Seca8g07303 2126 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 520 571 IPR000408 -
Seca8g07303 2126 CDD PH_PLC_plant-like 12 124 - -
Seca8g07303 2126 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 1404 1414 IPR000408 -
Seca8g07303 2126 MobiDBLite consensus disorder prediction 1709 1728 - -
Seca8g07303 2126 PRINTS Chromosome condensation regulator RCC1 signature 509 527 IPR000408 -
Seca8g07303 2126 PRINTS Chromosome condensation regulator RCC1 signature 350 366 IPR000408 -
Seca8g07303 2126 PRINTS Chromosome condensation regulator RCC1 signature 407 421 IPR000408 -
Seca8g07303 2126 PRINTS Chromosome condensation regulator RCC1 signature 567 588 IPR000408 -
Seca8g07303 2126 PRINTS Chromosome condensation regulator RCC1 signature 391 407 IPR000408 -
Seca8g07303 2126 PRINTS Chromosome condensation regulator RCC1 signature 300 316 IPR000408 -
Seca8g07303 2126 PRINTS Chromosome condensation regulator RCC1 signature 281 294 IPR000408 -
Seca8g07303 2126 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 284 294 IPR000408 -
Seca8g07303 2126 MobiDBLite consensus disorder prediction 1798 1815 - -
Seca8g07303 2126 SMART PH_update 1034 1139 IPR001849 -
Seca8g07303 2126 SMART PH_update 21 126 IPR001849 -
Seca8g07303 2126 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 1249 1310 IPR000408 -
Seca8g07303 2126 SUPERFAMILY RCC1/BLIP-II 1248 1638 IPR009091 -
Seca8g07303 2126 Gene3D - 1026 1142 IPR011993 -
Seca8g07303 2126 Gene3D - 13 129 IPR011993 -
Seca8g07303 2126 Gene3D - 185 460 IPR009091 -
Seca8g07303 2126 Gene3D - 1198 1473 IPR009091 -
Seca8g07303 2126 MobiDBLite consensus disorder prediction 696 715 - -
Seca8g07303 2126 Pfam FYVE zinc finger 1637 1703 IPR000306 GO:0046872
Seca8g07303 2126 Pfam FYVE zinc finger 624 690 IPR000306 GO:0046872
Seca8g07303 2126 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 1297 1307 IPR000408 -
Seca8g07303 2126 MobiDBLite consensus disorder prediction 785 802 - -
Seca8g07303 2126 MobiDBLite consensus disorder prediction 785 816 - -
Seca8g07303 2126 Pfam Transcription factor regulating root and shoot growth via Pin3 2047 2102 IPR013591 -
Seca8g07303 2126 CDD PH_PLC_plant-like 1025 1137 - -
Seca8g07303 2126 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 468 519 IPR000408 -
Seca8g07303 2126 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 1363 1417 IPR000408 -
Seca8g07303 2126 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 1533 1584 IPR000408 -
Seca8g07303 2126 MobiDBLite consensus disorder prediction 2106 2126 - -
Seca8g07303 2126 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 1641 1703 IPR017455 -
Seca8g07303 2126 SUPERFAMILY PH domain-like 1026 1136 - -
Seca8g07303 2126 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 1585 1636 IPR000408 -
Seca8g07303 2126 FunFam PH, RCC1 and FYVE domains-containing protein 1 1220 1470 - -
Seca8g07303 2126 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 628 690 IPR017455 -
Seca8g07303 2126 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 1311 1362 IPR000408 -
Seca8g07303 2126 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 391 401 IPR000408 -
Seca8g07303 2126 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 443 453 IPR000408 -
Seca8g07303 2126 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 405 456 IPR000408 -
Seca8g07303 2126 FunFam Putative E3 ubiquitin-protein ligase HERC1 630 698 - -
Seca8g07303 2126 Pfam Regulator of chromosome condensation (RCC1) repeat 1532 1581 IPR000408 -
Seca8g07303 2126 Pfam Regulator of chromosome condensation (RCC1) repeat 1311 1359 IPR000408 -
Seca8g07303 2126 Pfam Regulator of chromosome condensation (RCC1) repeat 1363 1414 IPR000408 -
Seca8g07303 2126 Pfam Regulator of chromosome condensation (RCC1) repeat 467 514 IPR000408 -
Seca8g07303 2126 Pfam Regulator of chromosome condensation (RCC1) repeat 573 620 IPR000408 -
Seca8g07303 2126 Pfam Regulator of chromosome condensation (RCC1) repeat 1480 1527 IPR000408 -
Seca8g07303 2126 Pfam Regulator of chromosome condensation (RCC1) repeat 405 453 IPR000408 -
Seca8g07303 2126 Pfam Regulator of chromosome condensation (RCC1) repeat 1418 1466 IPR000408 -
Seca8g07303 2126 Pfam Regulator of chromosome condensation (RCC1) repeat 298 346 IPR000408 -
Seca8g07303 2126 Pfam Regulator of chromosome condensation (RCC1) repeat 519 568 IPR000408 -
Seca8g07303 2126 Pfam Regulator of chromosome condensation (RCC1) repeat 350 401 IPR000408 -
Seca8g07303 2126 Pfam Regulator of chromosome condensation (RCC1) repeat 1586 1633 IPR000408 -
Seca8g07303 2126 SUPERFAMILY FYVE/PHD zinc finger 1637 1711 IPR011011 -
Seca8g07303 2126 ProSiteProfiles BRX domain profile. 2048 2103 IPR013591 -
Seca8g07303 2126 MobiDBLite consensus disorder prediction 2003 2019 - -
Seca8g07303 2126 CDD FYVE_like_SF 633 686 - -
Seca8g07303 2126 MobiDBLite consensus disorder prediction 147 207 - -
Seca8g07303 2126 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 298 349 IPR000408 -
Seca8g07303 2126 Coils Coil 1837 1874 - -
Seca8g07303 2126 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 236 297 IPR000408 -
Seca8g07303 2126 MobiDBLite consensus disorder prediction 1160 1220 - -
Seca8g07303 2126 CDD FYVE_like_SF 1646 1699 - -
Seca8g07303 2126 Coils Coil 874 894 - -
Seca8g07303 2126 MobiDBLite consensus disorder prediction 1798 1829 - -
Seca8g07303 2126 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1648 1709 IPR013083 -
Seca8g07303 2126 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 635 696 IPR013083 -
Seca8g07303 2126 SUPERFAMILY PH domain-like 13 123 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca8g07303 Seca-Chr8 169646214 169666450 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07303 2049 2119 Major Intrinsic Protein MIP AT1G31880 46.479 2.89e-14 75.1
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07303 - - gmx:100783270 1959.5