Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca8g07303 | ATGGCAGATCTTGTTAGCTACAGGAATGCCGACCGTGACATCGAGCAGGCATTGATTGCTTTGAAAAAGGGTGCTCAGCTGCTTAAATATGGTCGTAAGGGAAAGCCTAAGTTTTGTTCATTTAGACTTTCCAATGATGAATTGTCTTTAATCTGGATTTCAAGTAGTGGAGAAAGAAGTTTGAAGCTATCTTCTGTCTCAAGAATTATTCCTGGACAAAGAACTGCTGTTTTCCAACGATATCTGCGTCCTGAGAAGGACTATTTGTCTTTTTCACTTATTTATAACCACGGGAAGCGATCTCTTGATTTGATTTGCAAGGATAAAGTTGAGGCAGAAGTGTGGATTGCTGGTCTCAAGGCATTGATATCTTCTGGTCAAGGTGGGCGGTCAAAAATTGATGGATGGAGTGATGGAGGCCTATATCTTGATGATAGTAGAGACTTGACATCAAGTAGTCCTAGTGAAAGTTCAGTTAGTGTTTCACAGGACATCAGTTCTCCTGACATTTCTCTTAGTGTGCCAAATACTTCTCCAAAGTCCTTTCAGCCTGAGAATACCTTAAATTTTGAACGCTCACATGCTCCATCAAACCCATCAAATATGCAAGTGAAAGGATCTGGTTCAGATGTTTTTCGTGTTAGTGTTTCAAGTGCCCCCAGCACATCCAGTCATGGGTCTGCACCGGATGATTATGATGCTCTTGGTGACGTATACATTTGGGGGGAGGTCATCTGTGAGAATGTTGTGAAAGTTGGTGCTGAGAAAAATGTCAGTTATCTCAGCCCAAGGGCAGATATTCTCCTCCCCAGGCCACTGGAGTCCAATGTGGTCTTAGATGTACTTCAAATAGCATGCGGTGTAAAACATGCTGCTCTAGTTACAAGGCAAGGTGAAATTTTTACATGGGGTGAAGAATCTGGTGGGCGTCTTGGCCATGGTGTTGGGAAGAATGTGGTTCAACCTCGTCTAGTTGAGGCACTGTCTTCTACAACCGTTGATTTTGTTGCCTGTGGGGAGTTTCATACATGTGCTGTTACAATGGCTGGGGAACTATATACATGGGGTGATGGTACTCATAATGCTGGGCTTCTTGGTCATGGTACAGATGTTAGTCACTGGATACCAAAGCGAATTGCAGGTCCACTAGAGGGGCTTCAAGTCGCTTTAGTCACCTGTGGTCCATGGCACACAGCTTTGATAACTTCAACTGGGCAGCTCTTTACATTTGGTGATGGAACATTTGGTGTCCTAGGCCATGGGGATAGGGAAAATGTTTCATATCCTAGAGAAGTAGAATCCCTATCTGGGTTGAGGACAATAGCTGTTGCATGTGGAGTGTGGCATACTGCAGCTGTCGTAGAGGTTATTGTGACACAATCCAGTGCAAGTGTGTCATCAGGTAAATTGTTTACTTGGGGTGATGGAGATAAAAATCGCCTTGGACATGGAGACAAAGAGGCCCGGCTCGAACCAACTTGCGTACCTTCACTTATTGATTACAATTTTCATAGAATTGCTTGCGGGCACAGTTTGACAGTAGGCCTGACAACATCTGGACATGTTTTTACAATGGGAAGCACTGTTTATGGTCAGCTTGGAAATCCCCAGTCTGACGGAAAGGTGCCCTGTTTGGTTGAAGACAAGCTTGCTGGAGATTCTGTTGAAGAAATTGCATGTGGAGCTTATCATGTTGCTGTTTTAACATCCAAAAATGAAGTTTATACGTGGGGGAAGGGTGCAAATGGGCGATTGGGTCATGGAGATGTTGAAGATAGGAAAACACCTACTTTGGTTGAAGCCTTGAAGGATAGACATGTGAAATATATTGCATGTGGTTCAAACTACTCTGCTGCCATATGCCTTCATAAGTGGCAATCTGGTGCTGAGCAGTCTCAATGCTCTGCTTGTAGACAGGCATTTGGGTTCACTAGAAAGAGGCACAACTGTTATAATTGTGGACTTGTGCATTGTCATTCATGCAGTTCAAGGAAAGCATTGAGAGCAGCTCTGGCTCCAAATCCTGGGAAGCCATATCGTGTTTGTGATTCTTGTTATGCAAAATTGAATAAGGTTACAGAATCTGGCAATAATAATCGGAGGAATGCTATGCCTCGTTTGTCTGGTGAAAACAAGGACAGATTAGAAAAGTCTGAGCTAAGATTGTCGAAGTCAGCAGTGCCTTCTAATATGGATTTGATAAAGCAGCTAGATAGTAAGGCAGCCAAACAGGGGAAGAAGGCTGATACATTCTCTCTGGTTCGCGCCTCACAAGCGCCGTCTTTGCTACAGCTGAAAGATGTTGTCTTGTCTACTGCTATTGATCTGAAACGCACAGTTCCTAGACCTGTTCTTACACAATCTGGAGTGAGTTCCAGGTCTGTGTCCCCTTTCTCTAGAAGACCGAGTCCCCCTCGTTCTGCTACACCTATTCCAACAACATCAGGACTTTCCTTCTCAAAAAGTATTGCTGATAGTTTGAAGAAAACAAATGAACTATTGAACCAAGAAGTGCTGAAGTTACGTGGTCAGAGATGTGAACTGCAAGAATTAGAGCTTCAAAGGTCAGCAAAAAAGACCCAGGAAGCTATGGCACTGGCTGCTGAGGAATCTACCAAATCTAAGGCTGCAAAAGAAGTTATTAAGTCACTTACAGCACAGCTCAAAGATCTAGCTGAGAGGCTTCCTCCTGGTGTTTATGATGCTGAGAACATCAGACCAGTGTACCTGCCAAATGGTCTGGAGCCAAATGGCATCCACTATCCAGAGTTAAATGGGGAGCGTCACACCAGGGCTGAGTCAATCAGTGGCTCTAGTTTGGCTTCCATAGGTCTTGAATCTTCTCTGATGAATAGAACAGAAGGGAATTTCCCTGGAAGCTATGGAACTAGTCTTTACCAGCAAAGCCGGGGGCTTGTGGCCTCTAATGGGACAGATGATTACCCAGATGCTAAATTGCCAAATGGAAGTGGTGTGATTCAGGCAAGCAGCAACACGATCGCAGAGGGTGGTGGAGTTTCGGTGAATCTCTCACATGGAATGGCAGATCTTGTTAGCTACAGGAATGCCGACCGTGACATCGAGCAGGCATTGATTGCTTTGAAAAAGGGTGCTCAGCTGCTTAAATATGGTCGTAAGGGAAAGCCTAAGTTTTGTTCATTTAGACTTTCCAATGATGAATTGTCTTTAATCTGGATTTCAAGTAGTGGAGAAAGAAGTTTGAAGCTATCTTCTGTCTCAAGAATTATTCCTGGACAAAGAACTGCTGTTTTCCAACGATATCTGCGTCCTGAGAAGGACTATTTGTCTTTTTCACTTATTTATAACCACGGGAAGCGATCTCTTGATTTGATTTGCAAGGATAAAGTTGAGGCAGAAGTGTGGATTGCTGGTCTCAAGGCATTGATATCTTCTGGTCAAGGTGGGCGGTCAAAAATTGATGGATGGAGTGATGGAGGCCTATATCTTGATGATAGTAGAGACTTGACATCAAGTAGTCCTAGTGAAAGTTCAGTTAGTGTTTCACAGGACATCAGTTCTCCTGACATTTCTCTTAGTGTGCCAAATACTTCTCCAAAGTCCTTTCAGCCTGAGAATACCTTAAATTTTGAACGCTCACATGCTCCATCAAACCCATCAAATATGCAAGTGAAAGGATCTGGTTCAGATGTTTTTCGTGTTAGTGTTTCAAGTGCCCCCAGCACATCCAGTCATGGGTCTGCACCGGATGATTATGATGCTCTTGGTGACGTATACATTTGGGGGGAGGTCATCTGTGAGAATGTTGTGAAAGTTGGTGCTGAGAAAAATGTCAGTTATCTCAGCCCAAGGGCAGATATTCTCCTCCCCAGGCCACTGGAGTCCAATGTGGTCTTAGATGTACTTCAAATAGCATGCGGTGTAAAACATGCTGCTCTAGTTACAAGGCAAGGTGAAATTTTTACATGGGGTGAAGAATCTGGTGGGCGTCTTGGCCATGGTGTTGGGAAGAATGTGGTTCAACCTCGTCTAGTTGAGGCACTGTCTTCTACAACCGTTGATTTTGTTGCCTGTGGGGAGTTTCATACATGTGCTGTTACAATGGCTGGGGAACTATATACATGGGGTGATGGTACTCATAATGCTGGGCTTCTTGGTCATGGTACAGATGTTAGTCACTGGATACCAAAGCGAATTGCAGGTCCACTAGAGGGGCTTCAAGTCGCTTTAGTCACCTGTGGTCCATGGCACACAGCTTTGATAACTTCAACTGGGCAGCTCTTTACATTTGGTGATGGAACATTTGGTGTCCTAGGCCATGGGGATAGGGAAAATGTTTCATATCCTAGAGAAGTAGAATCCCTATCTGGGTTGAGGACAATAGCTGTTGCATGTGGAGTGTGGCATACTGCAGCTGTCGTAGAGGTTATTGTGACACAATCCAGTGCAAGTGTGTCATCAGGTAAATTGTTTACTTGGGGTGATGGAGATAAAAATCGCCTTGGACATGGAGACAAAGAGGCCCGGCTCGAACCAACTTGCGTACCTTCACTTATTGATTACAATTTTCATAGAATTGCTTGCGGGCACAGTTTGACAGTAGGCCTGACAACATCTGGACATGTTTTTACAATGGGAAGCACTGTTTATGGTCAGCTTGGAAATCCCCAGTCTGACGGAAAGGTGCCCTGTTTGGTTGAAGACAAGCTTGCTGGAGATTCTGTTGAAGAAATTGCATGTGGAGCTTATCATGTTGCTGTTTTAACATCCAAAAATGAAGTTTATACGTGGGGGAAGGGTGCAAATGGGCGATTGGGTCATGGAGATGTTGAAGATAGGAAAACACCTACTTTGGTTGAAGCCTTGAAGGATAGACATGTGAAATATATTGCATGTGGTTCAAACTACTCTGCTGCCATATGCCTTCATAAGTGGCAATCTGGTGCTGAGCAGTCTCAATGCTCTGCTTGTAGACAGGCATTTGGGTTCACTAGAAAGAGGCACAACTGTTATAATTGTGGACTTGTGCATTGTCATTCATGCAGTTCAAGGAAAGCATTGAGAGCAGCTCTGGCTCCAAATCCTGGGAAGCCATATCGTGTTTGTGATTCTTGTTATGCAAAATTGAATAAGGTTACAGAATCTGGCAATAATAATCGGAGGAATGCTATGCCTCGTTTGTCTGGTGAAAACAAGGACAGATTAGAAAAGTCTGAGCTAAGATTGTCGAAGTCAGCAGTGCCTTCTAATATGGATTTGATAAAGCAGCTAGATAGTAAGGCAGCCAAACAGGGGAAGAAGGCTGATACATTCTCTCTGGTTCGCGCCTCACAAGCGCCGTCTTTGCTACAGCTGAAAGATGTTGTCTTGTCTACTGCTATTGATCTGAAACGCACAGTTCCTAGACCTGTTCTTACACAATCTGGAGTGAGTTCCAGGTCTGTGTCCCCTTTCTCTAGAAGACCGAGTCCCCCTCGTTCTGCTACACCTATTCCAACAACATCAGGACTTTCCTTCTCAAAAAGTATTGCTGATAGTTTGAAGAAAACAAATGAACTATTGAACCAAGAAGTGCTGAAGTTACGTGGTCAGAGATGTGAACTGCAAGAATTAGAGCTTCAAAGGTCAGCAAAAAAGACCCAGGAAGCTATGGCACTGGCTGCTGAGGAATCTACCAAATCTAAGGCTGCAAAAGAAGTTATTAAGTCACTTACAGCACAGCTCAAAGATCTAGCTGAGAGGCTTCCTCCTGGTGTTTATGATGCTGAGAACATCAGACCAGTGTACCTGCCAAATGGTCTGGAGCCAAATGGCATCCACTATCCAGAGTTAAATGGGGAGCGTCACACCAGGGCTGAGTCAATCAGTGGCTCTAGTTTGGCTTCCATAGGTCTTGAATCTTCTCTGATGAATAGAACAGAAGGGAATTTCCCTGGAAGCTATGGAACTAGTCTTTACCAGCAAAGCCGGGGGCTTGTGGCCTCTAATGGGACAGATGATTACCCAGATGCTAAATTGCCAAATGGAAGTGGTGTGATTCAGGCAAGCAGCAACAGTGTGTCAGATACTGCTGAGGGTAGGGATTCTGGGCATTTCCAAGATGATGAGAATGATTTGAGATCGAGGAATGCTGCATTGCCTGCTAATAGTAATCAAATTGAAGCAGAATGGATCGAACAGTATGAACCTGGTGTCTATATAACACTTGTTGCCCTGCGAGATGGAACGAGAGATCTAAAGAGAGTGCGCTTCAGCCGGAGAAGATTTGGAGAGCACCAAGCAGAGACATGGTGGTCAGAGAACCGCGAGAAGGTATATGAAAGGTACAATGTTCGGAGCACAGACAAGTCTTCAAACCAAGCAGCACGTAGGGCAGAGGGTGCTGGTTCACCTGTTCTATAA | 6381 | 0.4435 | MADLVSYRNADRDIEQALIALKKGAQLLKYGRKGKPKFCSFRLSNDELSLIWISSSGERSLKLSSVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYNHGKRSLDLICKDKVEAEVWIAGLKALISSGQGGRSKIDGWSDGGLYLDDSRDLTSSSPSESSVSVSQDISSPDISLSVPNTSPKSFQPENTLNFERSHAPSNPSNMQVKGSGSDVFRVSVSSAPSTSSHGSAPDDYDALGDVYIWGEVICENVVKVGAEKNVSYLSPRADILLPRPLESNVVLDVLQIACGVKHAALVTRQGEIFTWGEESGGRLGHGVGKNVVQPRLVEALSSTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEARLEPTCVPSLIDYNFHRIACGHSLTVGLTTSGHVFTMGSTVYGQLGNPQSDGKVPCLVEDKLAGDSVEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAICLHKWQSGAEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDSCYAKLNKVTESGNNNRRNAMPRLSGENKDRLEKSELRLSKSAVPSNMDLIKQLDSKAAKQGKKADTFSLVRASQAPSLLQLKDVVLSTAIDLKRTVPRPVLTQSGVSSRSVSPFSRRPSPPRSATPIPTTSGLSFSKSIADSLKKTNELLNQEVLKLRGQRCELQELELQRSAKKTQEAMALAAEESTKSKAAKEVIKSLTAQLKDLAERLPPGVYDAENIRPVYLPNGLEPNGIHYPELNGERHTRAESISGSSLASIGLESSLMNRTEGNFPGSYGTSLYQQSRGLVASNGTDDYPDAKLPNGSGVIQASSNTIAEGGGVSVNLSHGMADLVSYRNADRDIEQALIALKKGAQLLKYGRKGKPKFCSFRLSNDELSLIWISSSGERSLKLSSVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYNHGKRSLDLICKDKVEAEVWIAGLKALISSGQGGRSKIDGWSDGGLYLDDSRDLTSSSPSESSVSVSQDISSPDISLSVPNTSPKSFQPENTLNFERSHAPSNPSNMQVKGSGSDVFRVSVSSAPSTSSHGSAPDDYDALGDVYIWGEVICENVVKVGAEKNVSYLSPRADILLPRPLESNVVLDVLQIACGVKHAALVTRQGEIFTWGEESGGRLGHGVGKNVVQPRLVEALSSTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEARLEPTCVPSLIDYNFHRIACGHSLTVGLTTSGHVFTMGSTVYGQLGNPQSDGKVPCLVEDKLAGDSVEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAICLHKWQSGAEQSQCSACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDSCYAKLNKVTESGNNNRRNAMPRLSGENKDRLEKSELRLSKSAVPSNMDLIKQLDSKAAKQGKKADTFSLVRASQAPSLLQLKDVVLSTAIDLKRTVPRPVLTQSGVSSRSVSPFSRRPSPPRSATPIPTTSGLSFSKSIADSLKKTNELLNQEVLKLRGQRCELQELELQRSAKKTQEAMALAAEESTKSKAAKEVIKSLTAQLKDLAERLPPGVYDAENIRPVYLPNGLEPNGIHYPELNGERHTRAESISGSSLASIGLESSLMNRTEGNFPGSYGTSLYQQSRGLVASNGTDDYPDAKLPNGSGVIQASSNSVSDTAEGRDSGHFQDDENDLRSRNAALPANSNQIEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWWSENREKVYERYNVRSTDKSSNQAARRAEGAGSPVL. | 2127 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca8g07303 | 2126 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 1456 | 1466 | IPR000408 | - | |
| Seca8g07303 | 2126 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 1418 | 1469 | IPR000408 | - | |
| Seca8g07303 | 2126 | Coils | Coil | 1887 | 1907 | - | - | |
| Seca8g07303 | 2126 | Coils | Coil | 824 | 861 | - | - | |
| Seca8g07303 | 2126 | MobiDBLite | consensus disorder prediction | 1986 | 2031 | - | - | |
| Seca8g07303 | 2126 | SUPERFAMILY | RCC1/BLIP-II | 235 | 625 | IPR009091 | - | |
| Seca8g07303 | 2126 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 572 | 623 | IPR000408 | - | |
| Seca8g07303 | 2126 | FunFam | Putative E3 ubiquitin-protein ligase HERC1 | 1643 | 1711 | - | - | |
| Seca8g07303 | 2126 | SMART | fyve_4 | 622 | 691 | IPR000306 | GO:0046872 | |
| Seca8g07303 | 2126 | SMART | fyve_4 | 1635 | 1704 | IPR000306 | GO:0046872 | |
| Seca8g07303 | 2126 | Gene3D | - | 1474 | 1647 | IPR009091 | - | |
| Seca8g07303 | 2126 | Gene3D | - | 461 | 634 | IPR009091 | - | |
| Seca8g07303 | 2126 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 1071 | 1902 | - | - | |
| Seca8g07303 | 2126 | FunFam | PH, RCC1 and FYVE domains-containing protein 1 | 207 | 457 | - | - | |
| Seca8g07303 | 2126 | Pfam | Pleckstrin homology domain | 1028 | 1136 | IPR001849 | - | |
| Seca8g07303 | 2126 | Pfam | Pleckstrin homology domain | 15 | 123 | IPR001849 | - | |
| Seca8g07303 | 2126 | SUPERFAMILY | FYVE/PHD zinc finger | 624 | 698 | IPR011011 | - | |
| Seca8g07303 | 2126 | FunFam | PH, RCC1 and FYVE domains-containing protein 1 | 458 | 629 | - | - | |
| Seca8g07303 | 2126 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 1481 | 1532 | IPR000408 | - | |
| Seca8g07303 | 2126 | Pfam | Transcription factor BRX N-terminal domain | 1882 | 1917 | IPR027988 | - | |
| Seca8g07303 | 2126 | Pfam | Transcription factor BRX N-terminal domain | 869 | 904 | IPR027988 | - | |
| Seca8g07303 | 2126 | FunFam | PH, RCC1 and FYVE domains-containing protein 1 | 1471 | 1642 | - | - | |
| Seca8g07303 | 2126 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 350 | 404 | IPR000408 | - | |
| Seca8g07303 | 2126 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 520 | 571 | IPR000408 | - | |
| Seca8g07303 | 2126 | CDD | PH_PLC_plant-like | 12 | 124 | - | - | |
| Seca8g07303 | 2126 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 1404 | 1414 | IPR000408 | - | |
| Seca8g07303 | 2126 | MobiDBLite | consensus disorder prediction | 1709 | 1728 | - | - | |
| Seca8g07303 | 2126 | PRINTS | Chromosome condensation regulator RCC1 signature | 509 | 527 | IPR000408 | - | |
| Seca8g07303 | 2126 | PRINTS | Chromosome condensation regulator RCC1 signature | 350 | 366 | IPR000408 | - | |
| Seca8g07303 | 2126 | PRINTS | Chromosome condensation regulator RCC1 signature | 407 | 421 | IPR000408 | - | |
| Seca8g07303 | 2126 | PRINTS | Chromosome condensation regulator RCC1 signature | 567 | 588 | IPR000408 | - | |
| Seca8g07303 | 2126 | PRINTS | Chromosome condensation regulator RCC1 signature | 391 | 407 | IPR000408 | - | |
| Seca8g07303 | 2126 | PRINTS | Chromosome condensation regulator RCC1 signature | 300 | 316 | IPR000408 | - | |
| Seca8g07303 | 2126 | PRINTS | Chromosome condensation regulator RCC1 signature | 281 | 294 | IPR000408 | - | |
| Seca8g07303 | 2126 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 284 | 294 | IPR000408 | - | |
| Seca8g07303 | 2126 | MobiDBLite | consensus disorder prediction | 1798 | 1815 | - | - | |
| Seca8g07303 | 2126 | SMART | PH_update | 1034 | 1139 | IPR001849 | - | |
| Seca8g07303 | 2126 | SMART | PH_update | 21 | 126 | IPR001849 | - | |
| Seca8g07303 | 2126 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 1249 | 1310 | IPR000408 | - | |
| Seca8g07303 | 2126 | SUPERFAMILY | RCC1/BLIP-II | 1248 | 1638 | IPR009091 | - | |
| Seca8g07303 | 2126 | Gene3D | - | 1026 | 1142 | IPR011993 | - | |
| Seca8g07303 | 2126 | Gene3D | - | 13 | 129 | IPR011993 | - | |
| Seca8g07303 | 2126 | Gene3D | - | 185 | 460 | IPR009091 | - | |
| Seca8g07303 | 2126 | Gene3D | - | 1198 | 1473 | IPR009091 | - | |
| Seca8g07303 | 2126 | MobiDBLite | consensus disorder prediction | 696 | 715 | - | - | |
| Seca8g07303 | 2126 | Pfam | FYVE zinc finger | 1637 | 1703 | IPR000306 | GO:0046872 | |
| Seca8g07303 | 2126 | Pfam | FYVE zinc finger | 624 | 690 | IPR000306 | GO:0046872 | |
| Seca8g07303 | 2126 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 1297 | 1307 | IPR000408 | - | |
| Seca8g07303 | 2126 | MobiDBLite | consensus disorder prediction | 785 | 802 | - | - | |
| Seca8g07303 | 2126 | MobiDBLite | consensus disorder prediction | 785 | 816 | - | - | |
| Seca8g07303 | 2126 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 2047 | 2102 | IPR013591 | - | |
| Seca8g07303 | 2126 | CDD | PH_PLC_plant-like | 1025 | 1137 | - | - | |
| Seca8g07303 | 2126 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 468 | 519 | IPR000408 | - | |
| Seca8g07303 | 2126 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 1363 | 1417 | IPR000408 | - | |
| Seca8g07303 | 2126 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 1533 | 1584 | IPR000408 | - | |
| Seca8g07303 | 2126 | MobiDBLite | consensus disorder prediction | 2106 | 2126 | - | - | |
| Seca8g07303 | 2126 | ProSiteProfiles | Zinc finger FYVE/FYVE-related type profile. | 1641 | 1703 | IPR017455 | - | |
| Seca8g07303 | 2126 | SUPERFAMILY | PH domain-like | 1026 | 1136 | - | - | |
| Seca8g07303 | 2126 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 1585 | 1636 | IPR000408 | - | |
| Seca8g07303 | 2126 | FunFam | PH, RCC1 and FYVE domains-containing protein 1 | 1220 | 1470 | - | - | |
| Seca8g07303 | 2126 | ProSiteProfiles | Zinc finger FYVE/FYVE-related type profile. | 628 | 690 | IPR017455 | - | |
| Seca8g07303 | 2126 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 1311 | 1362 | IPR000408 | - | |
| Seca8g07303 | 2126 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 391 | 401 | IPR000408 | - | |
| Seca8g07303 | 2126 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 443 | 453 | IPR000408 | - | |
| Seca8g07303 | 2126 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 405 | 456 | IPR000408 | - | |
| Seca8g07303 | 2126 | FunFam | Putative E3 ubiquitin-protein ligase HERC1 | 630 | 698 | - | - | |
| Seca8g07303 | 2126 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 1532 | 1581 | IPR000408 | - | |
| Seca8g07303 | 2126 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 1311 | 1359 | IPR000408 | - | |
| Seca8g07303 | 2126 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 1363 | 1414 | IPR000408 | - | |
| Seca8g07303 | 2126 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 467 | 514 | IPR000408 | - | |
| Seca8g07303 | 2126 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 573 | 620 | IPR000408 | - | |
| Seca8g07303 | 2126 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 1480 | 1527 | IPR000408 | - | |
| Seca8g07303 | 2126 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 405 | 453 | IPR000408 | - | |
| Seca8g07303 | 2126 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 1418 | 1466 | IPR000408 | - | |
| Seca8g07303 | 2126 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 298 | 346 | IPR000408 | - | |
| Seca8g07303 | 2126 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 519 | 568 | IPR000408 | - | |
| Seca8g07303 | 2126 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 350 | 401 | IPR000408 | - | |
| Seca8g07303 | 2126 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 1586 | 1633 | IPR000408 | - | |
| Seca8g07303 | 2126 | SUPERFAMILY | FYVE/PHD zinc finger | 1637 | 1711 | IPR011011 | - | |
| Seca8g07303 | 2126 | ProSiteProfiles | BRX domain profile. | 2048 | 2103 | IPR013591 | - | |
| Seca8g07303 | 2126 | MobiDBLite | consensus disorder prediction | 2003 | 2019 | - | - | |
| Seca8g07303 | 2126 | CDD | FYVE_like_SF | 633 | 686 | - | - | |
| Seca8g07303 | 2126 | MobiDBLite | consensus disorder prediction | 147 | 207 | - | - | |
| Seca8g07303 | 2126 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 298 | 349 | IPR000408 | - | |
| Seca8g07303 | 2126 | Coils | Coil | 1837 | 1874 | - | - | |
| Seca8g07303 | 2126 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 236 | 297 | IPR000408 | - | |
| Seca8g07303 | 2126 | MobiDBLite | consensus disorder prediction | 1160 | 1220 | - | - | |
| Seca8g07303 | 2126 | CDD | FYVE_like_SF | 1646 | 1699 | - | - | |
| Seca8g07303 | 2126 | Coils | Coil | 874 | 894 | - | - | |
| Seca8g07303 | 2126 | MobiDBLite | consensus disorder prediction | 1798 | 1829 | - | - | |
| Seca8g07303 | 2126 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1648 | 1709 | IPR013083 | - | |
| Seca8g07303 | 2126 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 635 | 696 | IPR013083 | - | |
| Seca8g07303 | 2126 | SUPERFAMILY | PH domain-like | 13 | 123 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca8g07303 | Seca-Chr8 | 169646214 | 169666450 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Seca8g07303 | 2049 | 2119 | Major Intrinsic Protein MIP | AT1G31880 | 46.479 | 2.89e-14 | 75.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca8g07303 | - | - | gmx:100783270 | 1959.5 |