Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07291 ATGGCAATGGCTTTCATTCCAGCAGCTCATGCCGCAGAGCTGTTGAGTAATGCCGAGCTCTCTAGAGAAGAAGAGACACAGAGAGACATTGATGATGAAGCTGAGAATAATAAACATATCAACCTTGCTATCACCGAGTGCACTACTGGCGAGACACAACACAATTTGGTTGCAGTAATTGCTCACTATGTCCACACTCTAAATCAATACAACTCTCGCAACTTAGGCTACCCCACTAATCAGGACTTCAACTATGACGTATTAGCACCGTTGCTTCATTTTCACCTAAACAATGCTGGCGATCCATTTCTAGGTAGCAGCTTCTCTCTGAATTCAACAGCATTTGAAGTGTCGGTGCTTGATTGGTTTGCGAATCTGTGGGAGATAGAAAAGAGTGAGTATTGGGGGTACGTCACAACTGGTGGAACTGAAGGCAATCTTCACGGGATTCTAGTAGGGAGAGAACAATTTTCAGATGGAATCTTATATACTTCAGAAGATTCACATTATTCAATATTCAAAATAGCAAGAATGTATCGAATGCCGTGTGTGAAAGTTGGCACTTTAGTGTCTGGTGAAATCGATTGTGCTGAACTACAAACTTCACTACTTGCTCACAAGGACAAGCCAGCCATCATCAATCTAAACATAGGGACGACTATGAAAGGAGGTGTTGATGACCTTGATCTTGTCATACGAACACTTGAGAAATGCGGTTTCACTCAAGATCGATTCTATATTCACTGTGATGGAGCCCTACTTGGAATCATGTTGCCTTTCCTCAAACAAGCACCAAGGATCACCTTCAAGAAACCCATTGGAAGTGTAACGGTATCTGGTCACAAGTTCTTGGGATGCCCAACTCCTTGTGGTATTGTGATAACACGTTTAAAATACATCAATGGACTGTCTAAAGATATTGAAATCATTGCTTCAAGAGATGCCACAATCACAGGTAGCCGTAGCGGACATGCTCCAATCTTCCTCTGGTATGCTCTCAAAAAAAGGGGGTTAATAGGACTCAAGAACGAAGTACATAAATGCATAATGAATGCACGGTACTTGTATGATCGACTACGTGATGCCGGTGTTGGTACGATGTTAAATGAGTTTAGCAACACAGTTGTCTTTGAGAAGCCCTTGGATGATGACTTTACTCGTAGGTGGAATCTAGCATGCAAAGGAAATATTACACATGTGGTGGTGATGCAACACGTTACCATTGAAATGCTTGACTTCTTTGTTAGTGAATTTCTTCAAAAGCGATCCATATGGTTGAAAGATGGACATTCTCAGTCCTTATTAGAGACGAATGCAGAGGGGGCAGCATGTGGACTTGATCCCCTCCCTTGCTCCTATAATTAA 1365 0.4212 MAMAFIPAAHAAELLSNAELSREEETQRDIDDEAENNKHINLAITECTTGETQHNLVAVIAHYVHTLNQYNSRNLGYPTNQDFNYDVLAPLLHFHLNNAGDPFLGSSFSLNSTAFEVSVLDWFANLWEIEKSEYWGYVTTGGTEGNLHGILVGREQFSDGILYTSEDSHYSIFKIARMYRMPCVKVGTLVSGEIDCAELQTSLLAHKDKPAIINLNIGTTMKGGVDDLDLVIRTLEKCGFTQDRFYIHCDGALLGIMLPFLKQAPRITFKKPIGSVTVSGHKFLGCPTPCGIVITRLKYINGLSKDIEIIASRDATITGSRSGHAPIFLWYALKKRGLIGLKNEVHKCIMNARYLYDRLRDAGVGTMLNEFSNTVVFEKPLDDDFTRRWNLACKGNITHVVVMQHVTIEMLDFFVSEFLQKRSIWLKDGHSQSLLETNAEGAACGLDPLPCSYN. 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07291 454 Pfam Pyridoxal-dependent decarboxylase conserved domain 111 371 IPR002129 GO:0016830|GO:0019752|GO:0030170
Seca8g07291 454 Gene3D - 92 333 IPR015421 GO:0003824
Seca8g07291 454 SUPERFAMILY PLP-dependent transferases 69 419 IPR015424 -
Seca8g07291 454 Gene3D Aspartate Aminotransferase, domain 1 334 422 IPR015422 GO:0003824
Seca8g07291 454 PANTHER - 22 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07291 Seca-Chr8 169419339 169423625 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07291 217 363 Calmodulin-binding Proteins AT2G02000 27.950 4.55e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07291 K25193 - gmx:100781665 684.1