Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07282 ATGGAATCTGATCATTCATCCCTCAACCACACCAAATTTGTGCATCCAAACAATGACCCTGAACAACATGCAACTCTAGAGATTGAAAGTGAGGAGTTTGATTACTCAAAAAGATCCCAATGGCTACGTGCTGCTGTGTTAGGAGCCAATGATGGGTTGGTCTCTACAGCATCTCTAATGATGGGTGTGGGAGCAGTGAAACAAGACATCAAGGTAATGATCTTATCAGGTTTTGCAGGGCTGGTAGCAGGGGCATGTAGCATGGCCATAGGGGAGTTTGTGTCAGTGTACTCACAATTGGACATAGAAGTTGCTCAATTGAAAAGAGACAAGGAACAAAGAGGAGAAAGAGAAGGAGAAGATGACAAAGAGAAAGAAAGCTTACCAAACCCTTTACAAGCAGCAGCAGCCTCAGCTTTAGCATTTTCAGTTGGTGCAATGGTTCCCCTGCTTGCAGCCTCTTTTATAAGAGATTATAAGGTAAGGCTTGGAGTGGTTTTGGGAGCAGTTAGCTTTGCTTTGGTGGTGTTTGGTTTGTTGGGAGCAGTGTTGGGTAAGGCTCCAGTATTGAGGTCTTGTTTGAGGGTCTTAATTGGGGGTTGGTTAGCCATGGCTATAACTTTTGGGCTAACCAAGTTGATTGGGTCAAGCGGGCTTTAG 660 0.447 MESDHSSLNHTKFVHPNNDPEQHATLEIESEEFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMILSGFAGLVAGACSMAIGEFVSVYSQLDIEVAQLKRDKEQRGEREGEDDKEKESLPNPLQAAAASALAFSVGAMVPLLAASFIRDYKVRLGVVLGAVSFALVVFGLLGAVLGKAPVLRSCLRVLIGGWLAMAITFGLTKLIGSSGL. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07282 219 CDD Nodulin-21 40 188 - -
Seca8g07282 219 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 16 214 IPR008217 GO:0005384|GO:0030026
Seca8g07282 219 Pfam VIT family 124 211 IPR008217 GO:0005384|GO:0030026
Seca8g07282 219 Pfam VIT family 42 122 IPR008217 GO:0005384|GO:0030026
Seca8g07282 219 MobiDBLite consensus disorder prediction 109 129 - -
Seca8g07282 219 MobiDBLite consensus disorder prediction 1 22 - -
Seca8g07282 219 MobiDBLite consensus disorder prediction 109 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07282 Seca-Chr8 169290181 169290840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07282 1 219 Nodulin-like Gene Family AT3G43660 67.123 3.99e-100 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07282 K22736 - gmx:100814343 335.495