Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07276 ATGGAAGGGAATTTGTCACAGGGAGGAATAATTCAAGGTGGGACTTCTTTTGGTGGCTTTGATTTGCCAGGATCATTACAGGTTCATCATCATCAAGCACAGCATCCCCATACCATGCACCAACATCAAACTCATCCGCGTCAAGGGACTTCTGTACATTCCTCGGTTCATGATTGTTTTCCACTTACAATGGGAAATTTACAGAACTGTGATCAAACCATTTCACTGGCAGACTTTAGTAAGGGAGATCGAAGCAAAAACTCAGCAAGTGATGAAGATGAGCCAAGCTTTACTGAGGATGGTGTTGATTGTCACCATGAAGCAGGTAGAGGTAAAAAGGGCTCACCTTGGCAGCGGGTGAAGTGGACTGATAAGATGGTAAAGCTTCTGATAACAGCTGTTTCTTATATTGGTGAGGATATAACTTCTGATGGTAGTGGCTGTGGAAGAAGGAAATTTGCAGTCCTACAGAAGAAGGGTAAGTGGAAATCCATTTCCAAGGTCATGGCTGAAAGGGGTTATCATGTTTCACCTCAGCAATGTGAGGATAAATTCAATGATCTTAATAAAAGGTATAAAAAGCTTAATGATATGCTAGGGAGGGGCACTTCTTGTCAGGTTGTTGAAAATCCTTCGCTGTTGGATGTCATAGATTATCTTTCTGAGAAAGAAAAGGATGATGTTCGAAAAATATTAAGCTCAAAACACTTGTTCTATGAAGAGATGTGTTCTTATCATAATGGTAATAGATTGCATTTACCCCATGATCCTGCATTGCAACGATCATTGCAAATAGCTCTTCGAAACAGAGATGATCATGATCATGATGATATCAGAAGGTCCCATCACGATGATCATGACGATGATGAGCAAGATGGGGAAATGGATGATCATGATGATTTTAAAGAGACATGTACTTCCCATGGTGATAGTAGAGGAATATTTGGGCCATTAGGTGGATCTATGAAGAAACTGAAACAGGGCCAAGGTCATGAAGATGCTAATACTTTTGGTAGTTCTTTAAATTGTCAAGGCTACAACAAAAGTTCATATCCCCATGGACAGATGGTCCAATCTGATGTTAATCAAGCTTTACCTGAAAGCATGAAAGCAGCTTGGTTACAGAAGCAATGGGTTGAATCTCGCTCACTTCAGTTGGAAGAGCAAAAGCTACAACTTCAGGTTGAGATGTTGGAGCTAGAGAAACAGAGATTCAAGTGGCAGAGGTTTAGCAAGAAAAAGGACCGGGAGCTGGAGAAGCTGAGTCTAGAAAATCAAAGAATGAAGCTTGAAAATGAACGTATTGCTTTGGAACTGAAACGAAAGGAAATGGGCTCCAGCTTTAACTAG 1350 0.4074 MEGNLSQGGIIQGGTSFGGFDLPGSLQVHHHQAQHPHTMHQHQTHPRQGTSVHSSVHDCFPLTMGNLQNCDQTISLADFSKGDRSKNSASDEDEPSFTEDGVDCHHEAGRGKKGSPWQRVKWTDKMVKLLITAVSYIGEDITSDGSGCGRRKFAVLQKKGKWKSISKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPSLLDVIDYLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQIALRNRDDHDHDDIRRSHHDDHDDDEQDGEMDDHDDFKETCTSHGDSRGIFGPLGGSMKKLKQGQGHEDANTFGSSLNCQGYNKSSYPHGQMVQSDVNQALPESMKAAWLQKQWVESRSLQLEEQKLQLQVEMLELEKQRFKWQRFSKKKDRELEKLSLENQRMKLENERIALELKRKEMGSSFN. 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07276 449 Pfam Myb/SANT-like DNA-binding domain 119 245 IPR044822 -
Seca8g07276 449 PANTHER F16F4.11 PROTEIN-RELATED 1 447 - -
Seca8g07276 449 Gene3D - 122 194 - -
Seca8g07276 449 MobiDBLite consensus disorder prediction 84 116 - -
Seca8g07276 449 MobiDBLite consensus disorder prediction 1 55 - -
Seca8g07276 449 MobiDBLite consensus disorder prediction 273 288 - -
Seca8g07276 449 Coils Coil 411 443 - -
Seca8g07276 449 Coils Coil 381 403 - -
Seca8g07276 449 MobiDBLite consensus disorder prediction 80 116 - -
Seca8g07276 449 MobiDBLite consensus disorder prediction 273 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07276 Seca-Chr8 169213346 169214695 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Seca8g07276 Myb_DNA-bind_4 6.1e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07276 - - gmx:100812134 735.717