Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07259 ATGGCGTCGTCGAAGATGATGCCGTCTTCCGATTCAACAAAGTCTGATTCCAAACCCCAATTCACCACCGCCACTTTCATGCCCATTTCCGACCACGCCGTCGATTCCACCCTCCTCGACGCTCAAATCTCCCTCGTCGACACCGCCGCAGCAGCCGCTCCCCCAAAATCCGTCGACGACGTCTGGCGGGAGATCGTCGCCGGCGAACGCAGGGAGTTCAAGGAGGAAGCTCCCGACGAGATGATGACCCTCGAGGATTTCCTCGTTAAGGCCGGCGCCGTCGACGACGAAGACGAGGAGGAGGTCAAGATGCCAGTCCCCCTCACCGAGAGGCTGAGTGGCAGTGCCGGCGGAGGTGTATTTGCGCTCGATCCTTCTCCGTTTCAGGGGATGGAGAGCGTTGAAGGGTCGGTGATTGGGTTTGGGAATGGGGTTGAGGTGGTTGAAGGAGGGAGAGGGAAGAGGGGGCGTCCCGTTTTGGAGCAATTGGATAAGGCTGCGCAGCAGAGGCAGAGGAGGATGATCAAGAACAGAGAATCTGCTGCTAGGTCTAGGGAACGCAAGCAGGCTTACCAAGTGGAATTGGAGTCTTTGGCGGTGAAGCTAGAGGAAGAAAATGACAAGTTGTTGAAGGAAAAGGCTGAGAAGAAAAAGGAGAGGTTCAAGCAGCTTATGGAGAAAGTGATCCCTGTTGTGGAGAAGCGGAGGCCACCACGTTTACTCCGTAGGCTTTCACATTCCACCACAATTCTAGTAGATGGATCTTCAGAGTGGAAGAACCCCACTGTCAACATTGGTGATTCCATAACTTTCAAGCACAAGCAACACTACAGCCTCTACATTTTCAAGAACCAGGAAGCCTTCAATCTCTGCAATTTCACTCAAGCCACTATTCTCACCAGTCCCAACACTACCTCTTACACGTGGCATCCATCTCGCCCTGGTTTCTTCTACTTTACCTTCAACAATGGCTCACTCAAATCATGCCAAGATTCTCAAAAGCTAGCCATAAAGGTTACTCCAGCAGTAGCAGCACCACCACCACAAAGTTCAGAACTTTCTCCAATAGCAACTCCAGCTCCCTCTTCTGGTGGAGAGGTACCATCTTCCCCTTCATTCCCATGGCCATTCCGTCCTCGCCAAGCAGCATCACCTGGTCCAGCACCAACTGCAACAGTTCCATTAGTACCAGACAAAGGTGGTGGCATGCCCTTCATTAACAGCAACCCTGCAGTTCCTCTGCCTACAGGTGAAGTAGATTCTGCTACCATACGCCCCCTACCCACCTCTGGTAATCAAGGACAGGTGATGATGATTGGGTCATTTGGATTTCCTATTGCTGTGCACACCATGGCTTTACTGCTGCTGTAA 1371 0.523 MASSKMMPSSDSTKSDSKPQFTTATFMPISDHAVDSTLLDAQISLVDTAAAAAPPKSVDDVWREIVAGERREFKEEAPDEMMTLEDFLVKAGAVDDEDEEEVKMPVPLTERLSGSAGGGVFALDPSPFQGMESVEGSVIGFGNGVEVVEGGRGKRGRPVLEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAEKKKERFKQLMEKVIPVVEKRRPPRLLRRLSHSTTILVDGSSEWKNPTVNIGDSITFKHKQHYSLYIFKNQEAFNLCNFTQATILTSPNTTSYTWHPSRPGFFYFTFNNGSLKSCQDSQKLAIKVTPAVAAPPPQSSELSPIATPAPSSGGEVPSSPSFPWPFRPRQAASPGPAPTATVPLVPDKGGGMPFINSNPAVPLPTGEVDSATIRPLPTSGNQGQVMMIGSFGFPIAVHTMALLLL. 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07259 456 Gene3D - 246 342 IPR008972 -
Seca8g07259 456 MobiDBLite consensus disorder prediction 355 369 - -
Seca8g07259 456 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 167 225 - -
Seca8g07259 456 SUPERFAMILY Leucine zipper domain 169 220 IPR046347 GO:0003700|GO:0006355
Seca8g07259 456 MobiDBLite consensus disorder prediction 344 400 - -
Seca8g07259 456 SMART brlzneu 165 227 IPR004827 GO:0003700|GO:0006355
Seca8g07259 456 MobiDBLite consensus disorder prediction 1 21 - -
Seca8g07259 456 PANTHER OS04G0422700 PROTEIN 240 454 - -
Seca8g07259 456 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 172 187 IPR004827 GO:0003700|GO:0006355
Seca8g07259 456 CDD bZIP_plant_BZIP46 169 207 - -
Seca8g07259 456 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 167 219 IPR004827 GO:0003700|GO:0006355
Seca8g07259 456 SUPERFAMILY Cupredoxins 247 339 IPR008972 -
Seca8g07259 456 Coils Coil 188 227 - -
Seca8g07259 456 Pfam bZIP transcription factor 167 223 IPR004827 GO:0003700|GO:0006355
Seca8g07259 456 Gene3D - 167 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07259 Seca-Chr8 168985147 168992559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07259 35 244 bZIP Transcription Factor Family AT5G44080 51.230 1.90e-65 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca8g07259 bZIP_1 3.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07259 - - gmx:100800621 320.087