Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07248 ATGGCTTTTGCTTCTTGTATGAGTGCTTTCCTTCTCATCTCCACCTTTCTTTCTGTTTCCCAAGCACTAACCAATCCTCCTATAGTGAAGGGACTATCATGGACCTTCTATGATTCAACCTGCCCTAAACTTGAATCTATTATCAGATCAGAGCTCAAGAAGGTCTTCAACAAGGATATTGGTCAAGCTGCTGGCTTGCTTCGCCTTCACTTCCATGACTGCTTTGTTCAGGTTAATTTGTTATTAATGAAAATGCAGGGTTGTGATGGGTCAGTTTTGTTGGATGGATCAGCAAGTGGACCAAGTGAGAAAGATGCACCCCCCAACTTGAGCTTAAGGGCAACAGCTTTTAAGATTATCGAAGACCTTCGTGGCCGTGTTGAAAACAAGTGTGGAAGAGTTGTTTCCTGTGCCGACATCACTGCCATTGCCGCACGTGATGCTGTTTATCTTTCAGGAGGACCAGACTATGAAATCCCCTTGGGAAGGAGAGATGGGTTAACCTTTGCTACAAGGAATGTCACATTGGAAAACCTTCCAGCACCCTCAAGCAACACCACTACCATCCTAGACTCTCTTGCTAAAAAAAACCTTAACCCCACTGATGTTGTAGCACTCTCAGGTGGCCACACCATAGGCATCAGCCACTGCAGTTCTTTCACCAACAGGCTCTATCCTACCCAAGACCCTGTCATGGACAAAACCTTTGGAAAAAACCTCAAACTCACTTGCCCCACTTCCAACACAGACAACACCACAGTCCTTGACATCCGAAGCCCCAACACTTTTGATAACAAATACTATGTTGACCTCATGAACCGCCAGGGACTCTTCACCTCTGATCAAGATTTGTACACTGATAAGAGAACCAAGGACATTGTCACCAGCTTTGCTGTGAACCAAACTCTGTTCTTTGAGAAGTTTGTGACTGCTATGCTCAAAATGGGTCAGCTTAATGTGTTGACAGGAACTCAAGGGGAGATTCGTGCCAATTGCTCTGTCAGGAATAAGGACAGCAAATCCTTCTTGACCTCTATTGTGGAAGATGTGGTGGGAGGATTGATTGAAATGTAG 1074 0.4497 MAFASCMSAFLLISTFLSVSQALTNPPIVKGLSWTFYDSTCPKLESIIRSELKKVFNKDIGQAAGLLRLHFHDCFVQVNLLLMKMQGCDGSVLLDGSASGPSEKDAPPNLSLRATAFKIIEDLRGRVENKCGRVVSCADITAIAARDAVYLSGGPDYEIPLGRRDGLTFATRNVTLENLPAPSSNTTTILDSLAKKNLNPTDVVALSGGHTIGISHCSSFTNRLYPTQDPVMDKTFGKNLKLTCPTSNTDNTTVLDIRSPNTFDNKYYVDLMNRQGLFTSDQDLYTDKRTKDIVTSFAVNQTLFFEKFVTAMLKMGQLNVLTGTQGEIRANCSVRNKDSKSFLTSIVEDVVGGLIEM. 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07248 357 CDD secretory_peroxidase 31 334 IPR033905 GO:0004601|GO:0042744
Seca8g07248 357 Gene3D - 35 333 - -
Seca8g07248 357 PANTHER - 19 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07248 357 FunFam Peroxidase 180 315 - -
Seca8g07248 357 Gene3D Peroxidase, domain 2 181 316 - -
Seca8g07248 357 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g07248 357 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g07248 357 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g07248 357 SUPERFAMILY Heme-dependent peroxidases 27 338 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca8g07248 357 FunFam Peroxidase 35 192 - -
Seca8g07248 357 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Seca8g07248 357 PRINTS Plant peroxidase signature 115 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07248 357 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07248 357 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07248 357 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07248 357 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07248 357 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07248 357 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07248 357 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07248 357 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g07248 357 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Seca8g07248 357 ProSiteProfiles Plant heme peroxidase family profile. 31 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g07248 357 Pfam Peroxidase 49 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07248 Seca-Chr8 168851996 168854113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07248 2 357 Peroxidase AT1G71695 58.470 3.18e-158 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07248 K00430 - gmx:100775837 569.311