Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g07231 | ATGCCAGAATCGGAGATAGGGACGCCGACGGCGGCGTCGATGCCGGCAACACCGGATACGCCGGGAGGGCCACTATTCACGGCGCTACGAGTTGACTCACTGTCACACGAGCGTGACTCGTTCACAATGGCACGGTGCAAGTGTTTGCCGACTAAGGGCCATACGTGCATCGCTGATTTCTCTGCTGCCGTTTCAATTCCAAGTGTGTCTCTTGCTCAAAAGATTGGAGCAGAGTTTGTGGGGACGTTCATATTGATATTTGCAGCAACGGCTGGACCAATAGTGAACAACAAGTACAATGGAGCAGAGACTCTAATGGGAAATGCAGCTTGTGCAGGATTAACTGTGATGTTTATTATTCTATCCATTGGCCACATTTCTGGTGCACACCTCAACCCATCCCTCACCATTGCCTTTGCAACGTTTCGGCATTTCCCATGGGCCCATGTCCCAGCATACATAGCAGCACAAGTCTCTGCTTCCATTTGTGCCTGTTTTGCTCTCAAAGGTGTTTATCATCCTTTCCTCTCTGGTGGAGTCACTATCCCTTCTGTCAGCGTTGGCCAAGCTTTTGCAACTGAGTTTATAATCACTTTTATTCTCATGTTTGTCGTCACTGCTGTTGCTACTGATACTCGTGCGGTTGGTGAATTGGCAGGTATTGCTGTTGGGGCTACAGTTTTGCTCAACATTCTCATATCAGGGCCAACAAGTGGTGGATCGATGAATCCGGTGCGTACGTTGGGTCCAGCGGTTGCAGCAGGAAATTACAAGCATTTGTGGCTATATTTGGTGGCGCCAACGCTTGGTGCTCTTGTTGGTGCAGGCGTTTATTCTCTTGTCAAGCTGCGTGACGACCAAGCTGAACAGCCACAACCAGTGAGGAGCTTCCGTCGCTAG | 900 | 0.5 | MPESEIGTPTAASMPATPDTPGGPLFTALRVDSLSHERDSFTMARCKCLPTKGHTCIADFSAAVSIPSVSLAQKIGAEFVGTFILIFAATAGPIVNNKYNGAETLMGNAACAGLTVMFIILSIGHISGAHLNPSLTIAFATFRHFPWAHVPAYIAAQVSASICACFALKGVYHPFLSGGVTIPSVSVGQAFATEFIITFILMFVVTAVATDTRAVGELAGIAVGATVLLNILISGPTSGGSMNPVRTLGPAVAAGNYKHLWLYLVAPTLGALVGAGVYSLVKLRDDQAEQPQPVRSFRR. | 300 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g07231 | 299 | PRINTS | Major intrinsic protein family signature | 193 | 211 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Seca8g07231 | 299 | PRINTS | Major intrinsic protein family signature | 149 | 168 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Seca8g07231 | 299 | PRINTS | Major intrinsic protein family signature | 224 | 246 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Seca8g07231 | 299 | PRINTS | Major intrinsic protein family signature | 112 | 136 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Seca8g07231 | 299 | PRINTS | Major intrinsic protein family signature | 261 | 281 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Seca8g07231 | 299 | PRINTS | Major intrinsic protein family signature | 73 | 92 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Seca8g07231 | 299 | CDD | MIP | 73 | 281 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Seca8g07231 | 299 | FunFam | Aquaporin NIP2-1 | 61 | 293 | - | - | |
Seca8g07231 | 299 | Pfam | Major intrinsic protein | 68 | 278 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Seca8g07231 | 299 | PANTHER | AQUAPORIN NIP2-1 | 57 | 287 | IPR034294 | - | |
Seca8g07231 | 299 | SUPERFAMILY | Aquaporin-like | 69 | 285 | IPR023271 | - | |
Seca8g07231 | 299 | Gene3D | Glycerol uptake facilitator protein. | 60 | 293 | IPR023271 | - | |
Seca8g07231 | 299 | ProSitePatterns | MIP family signature. | 130 | 138 | IPR022357 | - | |
Seca8g07231 | 299 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g07231 | Seca-Chr8 | 168658114 | 168664387 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g07231 | 25 | 299 | Major Intrinsic Protein MIP | AT4G10380 | 75.445 | 4.18e-149 | 418 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g07231 | K09874 | - | gmx:100804356 | 545.428 |