Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07224 ATGCATTCCCACTTAGAGAGAATCCTGTGGAGCGAGGACCAAATCTCTCGCCGAGTCTCCGACCTCGCCGGTCAAATCGCCGCCGACTTTCCCGGCTCTTCTCCGCCGCCCGTTTTTGTCGGCGTGGCCACCGGCGCATTCCTCTTCCTTGCCGACCTCGTTCGTAAAATCGACCTCCCCATCACCGTTGATCTCGTCCGTGCTGAATCCTACGGTTCCGGAACTGTCTCCAATGGCGCGCCGACCATTTCTACCGATTTGAAGGTTGACATCAAAGGCCACCACGTCGTCTTGGTTGAAGACGTTGTAGACACAGGATATACTTTATCTAGAGTCATTGCACACTTGAAATCAAAAGGAGCGTCCTCTGTCTCTGTATGCACTCTCCTCGATAAACCAGCAAGGAGAAAAGTTAATATACAATTGGTGGGTAAAGGGAAATTCTACCGGGGATTTGAGGTGTTGCAATTGAACATGATGTCTGAGGAGTGA 492 0.5122 MHSHLERILWSEDQISRRVSDLAGQIAADFPGSSPPPVFVGVATGAFLFLADLVRKIDLPITVDLVRAESYGSGTVSNGAPTISTDLKVDIKGHHVVLVEDVVDTGYTLSRVIAHLKSKGASSVSVCTLLDKPARRKVNIQLVGKGKFYRGFEVLQLNMMSEE. 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07224 163 CDD PRTases_typeI 22 145 IPR000836 -
Seca8g07224 163 Pfam Phosphoribosyl transferase domain 15 138 IPR000836 -
Seca8g07224 163 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 2 154 - -
Seca8g07224 163 SUPERFAMILY PRTase-like 1 143 IPR029057 -
Seca8g07224 163 Gene3D - 1 156 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07224 Seca-Chr8 168539924 168543083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07224 1 154 PRT Gene Family AT1G71750 65.161 1.39e-69 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07224 K00760 - gmx:100797406 239.195