Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07191 ATGTACATGGGTTCCAAGCTTCAAGAAAACGTGATCAACATTTGGTGCCCTGTTTCAGGATGCAGTGGTTTGTTAGAGGCAGAGTATTGTCGTGCGATTCTTCCGCCGGAGGATTGCTCTGCACTGTTGATTGATGATGGAACAGAGACAATTAGGGAATCAGAGTGCCCTAATTGTGGGAGGTTGTTCTGCGCGCAGTGTAAGGTTCCTTGGCATATAGGGATAGAGTGCGATGAGTTTCAGAAGCTGAATGAGGACGAGAGGGGGAAGGACGATGTCATGTTGATGCATCTTGTGATATAA 303 0.4686 MYMGSKLQENVINIWCPVSGCSGLLEAEYCRAILPPEDCSALLIDDGTETIRESECPNCGRLFCAQCKVPWHIGIECDEFQKLNEDERGKDDVMLMHLVI. 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07191 100 SUPERFAMILY RING/U-box 29 82 - -
Seca8g07191 100 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 10 88 IPR031127 GO:0004842|GO:0016567
Seca8g07191 100 Pfam IBR domain, a half RING-finger domain 14 77 IPR002867 GO:0008270
Seca8g07191 100 SMART ibrneu5 1 77 IPR002867 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07191 Seca-Chr8 168242032 168242409 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07191 31 82 C3H Transcription Factor Family AT2G19610 40.984 5.58e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07191 K11975 - fve:101297587 148.288