Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07189 ATGGTGCTCCAAGTGTGCCTTTTCATCTTCTCCACTGTCATCTCCACCATTGCAGGAACCACCACCATCTCACCAAGCACAACCCTCTACGCTTCCAACACCACCCAATCATGGTCCTCTCCCAACAACACATTCTCTCTCCACTTCCTTCCCCTCCACCCCCAAACTTCCCCTCCTTCCTTCATCGCCGCCATTGTCTACTCCGGCGGCTCACCCCTCATTTGGTCCGCCGGAAACGGCACCACCGTGGACTCTGGCGGTTCCCTCCAGTTCCTTCCAGCCGGAAACCTCCGCCTCGTTAATGGGTCAGGCTCCACCGTGTGGGACTCTGGAACTTCCAACATGGGTGTCTCCTCTGCCATGCTTCATGACAATGGAAATTTGGTTCTCTCCAATGGCACTGACACTGTGTGGTCAAGCTTTGACAACCCCACTGATACCATTGTGCCTACTCAAAACTTCACTGTTGGTATGTTTTTGCGTTCTGGGTTGTACTCCTTTTCCGTTCTTAGGTCCGGGAACCTCACCCTCAAATGGGGTGATAGTGTGCCTTACTGGGAACAGGGTCTAAACTCTTCCATGAGTTTGGTGAATTTGAGTTCACCTGTTTTGGGGTTGCAATCAGTAGGAATTTTGCAGCTTTTTGATCCAAAATTGATTGCCCCTGTGATGGTTGCTTACAGTGATGACTATAATGAAGGGAATGATGATATGTTGAGGATTTTGAAGTTGGATGGTGATGGGAATTTAAGGATTTATAGCTCTAAGAAAGGTAGTGGGACTGTGACTGTGAGATGGGTTGCTGTTGAGGATCAATGTGAGGTTTTTGGTTATTGTGGAAATAATGGTATTTGTAGTTATAATAATTCCAACCCCATTTGTGGATGTCCATCTCAAAATTTTGAGATGGTTGATCCTAATGATAGTAGGAAAGGGTGTAAGAGGAAGGTGAGGCTTGAGGATTGTGAAGGGAAGGTGGCTATGTTGCAAGTGGACCATGCTCGATTCTTGACATATCCTCCTCAGTTTATGATCAATCCTGAGATATTTTTCATTGGTATATCAGCTTGCCGTGGAAATTGTCTTTCAGCCAGTTCTTGTTTTGGTTCTACTTCCTTGTCAGATGGAACTGGATTATGTTACATAAAGACCTCTAATTTTATTAGTGGCTACCAGAATCCAGCTCTACCTAGCACTTCATATATCAAGGTTTGTGGACCATTGGCTCCAAACTCACCACCTTCTTTGGAGAATGCTAGGGAGGGGAAGGATCGGAGGATACATGCTTGGATAGTTGCTGTAGTTGTTTTGAGTACCCTTTTAGCTTTCCTTGCCTTTGAGGGTGGTTTATGGTTGTGGTGCTGTAGAAATAGCGCAGGATTGGGAGGATTAGCTACTCAGTATGCTCTTCTTGAGTATGCTTCTGGTGCCCCTGTTCATTTCTCTTACAAGGAGCTCCATAGGTCCACAAAAGGGTTCAAGGAGAAACTTGGTGATGGGGGATTTGGTGCTGTATATAGAGGAGTTCTTGCAAATCAAACTGTTGTTGCAGTTAAGCAACTTGAGGGCATTGAGCAGGGTGAGAAACAGTTTAGGATGGAAGTTTCTACCATAAGTAGTACACATCATCTGAATTTAGTGAGGCTGATTGGTTTTTGCTCTGAAGGGCGTCACAGGCTTCTAGTATATGAGTTTATGAAAAATGGATCTCTTGATAACTTTCTTTTTGTTGGTGAACAGCAGTCAGGAAAAGTATTGAATTGGGGGTATAGATACACCATTGCCTTAGGTGCTGCTAGGGGCTTGACATACCTTCATGAGGAGTGTAGAAACTGCATTGTCCATTGTGATGTAAAACCTGAAAACATTCTTTTAGATGAGAATTACAATGCAAAAGTCTCAGATTTTGGCCTTGCAAAGCTGTTAAGTCCAAGGGATCACAGGCACCGGACCTTGACAAGTGTGAGAGGTACCAGAGGGTATTTAGCTCCTGAATGGCTTGCAAACCTTCCCATAACTTCCAAATCTGATGTTTACAGTTATGGTATGGTTTTGTTGGAGATAGTGAGTGGTAGAAGGAACTTTGAAATCTCAGAAGAGACAAGCAGAAAAAAGTTTTCCATTTGGGCTTATGAAGAGTTTGAGAAAGGTAACATCATGGGAGTAATTGACAGAAGAATGATTAGCCAAGAAGTCAACTTGGAACAAGCAAAAAGAGTGCTTCTGGCATGTTTTTGGTGCATACAGGAGCAGCCATCTCAGAGGCCTACAATGGGCAAAGTTGTGCAAATGCTAGAAGGTGTGATAGATATTGATAGGCCACCAACCCCAAAATTAATCACAGTAGGATCTTCTGGTGGAATCAATGGCAGTGTCACTCCTATCTCTACTATTGCAACCTCACCATCTCCAACTTTCTCGCCATCTTCATCTTTGTTGACTTGA 2445 0.4421 MVLQVCLFIFSTVISTIAGTTTISPSTTLYASNTTQSWSSPNNTFSLHFLPLHPQTSPPSFIAAIVYSGGSPLIWSAGNGTTVDSGGSLQFLPAGNLRLVNGSGSTVWDSGTSNMGVSSAMLHDNGNLVLSNGTDTVWSSFDNPTDTIVPTQNFTVGMFLRSGLYSFSVLRSGNLTLKWGDSVPYWEQGLNSSMSLVNLSSPVLGLQSVGILQLFDPKLIAPVMVAYSDDYNEGNDDMLRILKLDGDGNLRIYSSKKGSGTVTVRWVAVEDQCEVFGYCGNNGICSYNNSNPICGCPSQNFEMVDPNDSRKGCKRKVRLEDCEGKVAMLQVDHARFLTYPPQFMINPEIFFIGISACRGNCLSASSCFGSTSLSDGTGLCYIKTSNFISGYQNPALPSTSYIKVCGPLAPNSPPSLENAREGKDRRIHAWIVAVVVLSTLLAFLAFEGGLWLWCCRNSAGLGGLATQYALLEYASGAPVHFSYKELHRSTKGFKEKLGDGGFGAVYRGVLANQTVVAVKQLEGIEQGEKQFRMEVSTISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFVGEQQSGKVLNWGYRYTIALGAARGLTYLHEECRNCIVHCDVKPENILLDENYNAKVSDFGLAKLLSPRDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFEISEETSRKKFSIWAYEEFEKGNIMGVIDRRMISQEVNLEQAKRVLLACFWCIQEQPSQRPTMGKVVQMLEGVIDIDRPPTPKLITVGSSGGINGSVTPISTIATSPSPTFSPSSSLLT. 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07189 814 Gene3D - 16 142 IPR036426 -
Seca8g07189 814 MobiDBLite consensus disorder prediction 793 814 - -
Seca8g07189 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 143 - -
Seca8g07189 814 FunFam S-receptor-like serine/threonine-protein kinase 465 565 - -
Seca8g07189 814 ProSiteProfiles Bulb-type lectin domain profile. 14 143 IPR001480 -
Seca8g07189 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 144 268 - -
Seca8g07189 814 Gene3D Phosphorylase Kinase; domain 1 465 565 - -
Seca8g07189 814 Pfam Protein kinase domain 494 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07189 814 PANTHER OS07G0415500 PROTEIN 8 777 - -
Seca8g07189 814 SMART blect_4 29 144 IPR001480 -
Seca8g07189 814 Gene3D - 143 266 IPR036426 -
Seca8g07189 814 SUPERFAMILY Protein kinase-like (PK-like) 474 766 IPR011009 -
Seca8g07189 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 190 IPR036426 -
Seca8g07189 814 ProSiteProfiles Protein kinase domain profile. 491 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07189 814 PIRSF SRK 1 797 IPR024171 GO:0004674
Seca8g07189 814 SMART serkin_6 491 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07189 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Seca8g07189 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 566 775 - -
Seca8g07189 814 CDD B_lectin 65 144 IPR001480 -
Seca8g07189 814 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Seca8g07189 814 CDD STKc_IRAK 497 767 - -
Seca8g07189 814 Pfam D-mannose binding lectin 75 156 IPR001480 -
Seca8g07189 814 Gene3D Transferase(Phosphotransferase) domain 1 566 773 - -
Seca8g07189 814 Pfam S-locus glycoprotein domain 231 297 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07189 Seca-Chr8 168227686 168230130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07189 430 775 Receptor kinase-like Gene Family AT5G20050 41.257 8.25e-83 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Seca8g07189 Pkinase 1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07189 - - gmx:100810753 1324.69