Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07186 ATGGACACCAAACAAAACAACCACACTAAGCCTTCTTCTCTCCACGTCGAGGCTCCGCCTCCGGAGCCCAGCCCTCTCCGTAAGATCATCGTGGTGGCTTCCATCGCCGCCGGGGTTCAATTCGGGTGGGCCCTACAACTCTCTCTTCTCACTCCTTATGTTCAGTTACTCGGTATCCCTCACACCTCCGGCATGCTGGTTCAGCCCATCGTTGGCTACCACAGCGACCGTTGCACTTCACGCTTCGGTCGTCGCCGTCCTTTCATCGCCGCCGGCGCACTCGCCGTCGCCATCGCCGTCTTCCTGATCGGCTACGCCGCCGATTTCGGACACATGTTCGGCGACTCCTTAGAAAAAAAAACCCGCCCTCGCGCCATCGCTATCTTCGTCGTTGGATTCTGGATCCTCGACGTCGCTAACAACATGCTCCAGGGACCTTGCCGTGCACTCCTCGCTGACCTCTCCGCCGGCGATCACCGGAAAACACGGAACGCGAACGCGTTTTTCTCCTTCTTCATGGCCGTCGGCAACGTCCTTGGTTACGCCGCCGGAGCCTACAGTGGCCTCCACCACATATTTCCGTTCACCAAAACTAAGGCCTGTGACGTTTACTGCGCGAACTTGAAGAGCTGCTTCTTCCTCTCCATTGCGCTGCTCTTGACGCTGGCTACCGGCGCCATGATCTACGTGAAGGAAGAAACGCTGTCGTCTAAGAAAACCGTCGGTGGAGACGCCGACGAGGATGGTGCGGGTTCAGGCGGTGGCATGCCATGTTTTGGGCAGTTATTCGGTGCTTTTCGTGAACTGAAAAGGCCGATGTGGATCCTTCTATTGGTGACGTGTCTTAACTGGATTGCGTGGTTCCCTTTCTTGCTGTTCGACACTGATTGGATGGGGAGAGAAGTGTATGGAGGAACGGTTGGGGAAGGTAAAGCCTATGATATGGGTGTGCGCGCGGGTGCACTGGGACTCATGTTGAACTCCTTGGTGCTTGGTGCGACGTCGTTGGGAGTGGAAGTTTTGGCGCGTGGAGTTGGGGGCGTGAAGAGGTTGTGGGGAATCGTTAACTTCTTGCTTGCGATTTGTTTGGCCATGACCGTTTTGGTCACAAAGTTGGCCGAACATTCACGACGCTTCGTCCCCGGTCAGCAAGACCCTCTCCCGCCGTCCGGTGGCATCAAGGCCGGCGCGTTGACTCTCTTCTCCGTCCTCGGAATCCCTCTTGCGATTACTTACAGTATACCCTTTGCTCTGGCCTCTATATTCTCCAGCACCTCAGGGGCAGGCCAAGGTTTATCTCTGGGAGTTCTCAATCTTGCAATTGTCATACCACAGATGGTGGTGTCTGTGGTCAGTGGACCATGGGATGCTCTGTTTGGTGGTGGTAACTTGCCAGCGTTCGTGGTGGGTGCTGTGGCGGCTGCAGCCAGTGGCATATTAACTCTCACACTTAATTTCACAATGGCTACCAAACACAACAACAATCAAGCCCTCCACGTGGAGGCTCCGCCTCCGGAGTCAACTCCTCTGCGTAAGATTATAGCGGTGGCTTCCATCGCCGCCGGGGTGCAGTTCGGGTGGGCCCTACAACTCTCTCTTCTCACTCCCTACGTTCAGTTGCTGGGTATCCCTCATAAGCGGGCCTCCTTAATCTGGCTCTGCGGCCCAATCTCTGGTATTCTGGTCCAGCCCATCGTAGGCTACCACAGCGACCGTTGCACTTCCCGCTTTGGACGCCGCCGTCCCTTCATCACCGCCGGCGCCGTCGCAGTCGTCATCGCCGCCTTCCTCATCGGCTACTCCGCCGATCTCGGCCACTCATTCGGCGACTCGCTCGACAAAAAAACCCGTCCCCGCGCCATCGCCTTCTTCGTCGTCGGGTTCTGGATCTTCGACGTCGCCAACAACATGCTCCAGGGTCCATTGCGCGCCTTCCTCGGCGATCTCGCCGCCGGCGACCAACGGAAAACTCGAACCGCTAACGCCTTCTTTTCCTTCTTCATGGCCGTCGGCAACGTGTTCGGCTACTTCGCCGGATCCTTAAGCGGGCTCTATCACGTGTTTCCGTTCACGAAAACCGAGGCCTGCAACGCCTCATGCGCGAATCTGAAGAGCTGTTTCTTCATCTCCATCACTCTGCTCCTGACGCTGGCGACGCTGGCGATGATCTACGTGAAGGAGAAAACGGTGTCGTTTGAGAGCGTGGAAGGGGAAGGAGGGGGTGGCATTCGTTGTTTTGGGCAATTATTCGGTGCATTTCTTGAACTGAAGAAGCCTATGTGGATCCTTTTGTTGGTGACGTGTCTGAATTGGCTTGCGTGGTTCCCTTTCTTTCAGTTTGACACTGATTATGTGGGGAGAGAAGTGTACGGAGGAAATGTGGGGGAGAGTATCTTTGATAAAGGGGTGCGGTTGGGTACGTTGGGGCTCATGTTAAATTCTGTGGTACTGGGTGTGACGTCGTTGAGCATGGAAATGCTGGCGCGTGCGTTTGGAGGAGTGAAGAGGTTGTGGGGAATTGTCAACTTCTTGCTTGCGATTTGTTTGGGAATGACCGTTGTGGTGGCGAAGTTGGCTGAGCAATCCCGACAATACTCCGTCGTTAACCATCAGCCACTCCCGCCTCACGGTGGTATTAAGGCCGGCACGATGGTTCTATTTACCCTCATGGGAATCCCTCTAGCGGTAACCATTTAA 2697 0.5562 MDTKQNNHTKPSSLHVEAPPPEPSPLRKIIVVASIAAGVQFGWALQLSLLTPYVQLLGIPHTSGMLVQPIVGYHSDRCTSRFGRRRPFIAAGALAVAIAVFLIGYAADFGHMFGDSLEKKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLSAGDHRKTRNANAFFSFFMAVGNVLGYAAGAYSGLHHIFPFTKTKACDVYCANLKSCFFLSIALLLTLATGAMIYVKEETLSSKKTVGGDADEDGAGSGGGMPCFGQLFGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGTVGEGKAYDMGVRAGALGLMLNSLVLGATSLGVEVLARGVGGVKRLWGIVNFLLAICLAMTVLVTKLAEHSRRFVPGQQDPLPPSGGIKAGALTLFSVLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMVVSVVSGPWDALFGGGNLPAFVVGAVAAAASGILTLTLNFTMATKHNNNQALHVEAPPPESTPLRKIIAVASIAAGVQFGWALQLSLLTPYVQLLGIPHKRASLIWLCGPISGILVQPIVGYHSDRCTSRFGRRRPFITAGAVAVVIAAFLIGYSADLGHSFGDSLDKKTRPRAIAFFVVGFWIFDVANNMLQGPLRAFLGDLAAGDQRKTRTANAFFSFFMAVGNVFGYFAGSLSGLYHVFPFTKTEACNASCANLKSCFFISITLLLTLATLAMIYVKEKTVSFESVEGEGGGGIRCFGQLFGAFLELKKPMWILLLVTCLNWLAWFPFFQFDTDYVGREVYGGNVGESIFDKGVRLGTLGLMLNSVVLGVTSLSMEMLARAFGGVKRLWGIVNFLLAICLGMTVVVAKLAEQSRQYSVVNHQPLPPHGGIKAGTMVLFTLMGIPLAVTI. 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07186 898 CDD MFS_SLC45_SUC 513 897 - -
Seca8g07186 898 CDD MFS_SLC45_SUC 29 464 - -
Seca8g07186 898 Gene3D MFS general substrate transporter like domains 510 732 IPR036259 -
Seca8g07186 898 Gene3D MFS general substrate transporter like domains 27 239 IPR036259 -
Seca8g07186 898 MobiDBLite consensus disorder prediction 1 22 - -
Seca8g07186 898 SUPERFAMILY MFS general substrate transporter 27 486 IPR036259 -
Seca8g07186 898 Pfam MFS/sugar transport protein 66 285 - -
Seca8g07186 898 Pfam MFS/sugar transport protein 518 775 - -
Seca8g07186 898 NCBIfam sucrose/proton symporter 509 897 IPR005989 GO:0005886|GO:0008515|GO:0015770
Seca8g07186 898 NCBIfam sucrose/proton symporter 25 484 IPR005989 GO:0005886|GO:0008515|GO:0015770
Seca8g07186 898 SUPERFAMILY MFS general substrate transporter 511 854 IPR036259 -
Seca8g07186 898 PANTHER SUGAR TRANSPORTER 26 484 - -
Seca8g07186 898 FunFam Sucrose transport protein 23 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07186 Seca-Chr8 168136769 168149444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07186 488 897 Sucrose Transporter Gene Family AT1G22710 63.033 3.74e-179 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07186 K15378 - gmx:547679 840.106