Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07165 ATGAGTTATTACACTATTGCAGGGATGCTGGGGAAACAGTTGAATTCCCCTCTACTTAGTATTGATTCTGCAGCACAGTTCTGCTATTGCAAGGCTGATCTTGTTGCTGCATCATCAAGTATTCCATTATCAAATATCAGGTTTTCTTGTAGATTTTCACCACGTGTAGAAAAAGCAACATGGACCTCAAATCTTTCTACCAATACCAAGCATTGGATATTGCATTCAACTGCACAGATAGAAAATACAATCACAAGTGATGAAGATCAGAGTATGTGGGAAGCATGTAAACAAGCTCTTTCTGCATTTAACTTTAGTGATGAAGAAAAGGACAAGATACTTGGAAAAGCATTTGGTCTTGTTCATTCTCCTTATTGGGGAGAGGAACGTAAGAAGGAAGTTCCCAAATTTGAGACAGTAAATGGAACATTAGACTATCTGAGGAGTTTAAATCTTTCTGATGAAGATCTCTCCAAGTTGCTCAAAAAGTTTCCAGAAGTTCTTGGATGTAATTTAGAGGAAGAGTTGAAAGCTAATATAAATATCCTGGATGAGCAGTGGGGTATTAAAGGAAAATCACTTAGAAACCTCCTCCTTCGAAATCCAAAAGTTTTGGGTTATAATGTTGATTGTAAGGGAGACTGTATGGCACAATGCACCAGATGCTGGGTTCGTTTCTAG 681 0.3789 MSYYTIAGMLGKQLNSPLLSIDSAAQFCYCKADLVAASSSIPLSNIRFSCRFSPRVEKATWTSNLSTNTKHWILHSTAQIENTITSDEDQSMWEACKQALSAFNFSDEEKDKILGKAFGLVHSPYWGEERKKEVPKFETVNGTLDYLRSLNLSDEDLSKLLKKFPEVLGCNLEEELKANINILDEQWGIKGKSLRNLLLRNPKVLGYNVDCKGDCMAQCTRCWVRF. 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07165 226 FunFam uncharacterized protein LOC106769908 76 222 - -
Seca8g07165 226 Pfam mTERF 144 208 IPR003690 GO:0003690|GO:0006355
Seca8g07165 226 Gene3D Transcription termination factor 3, mitochondrial 69 222 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07165 Seca-Chr8 167881004 167884357 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Seca8g07165 mTERF 3.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07165 - - gmx:100797265 377.867