Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07162 ATGGAAAAGGATCCAAAAATGAACCACATTTTTAACAAGGCTATGGCTGATATGTGTGTAACAGAGATAAAAAGAATACTTGAAATTTATACTGGATTTGAGGGAATATCAACATTGGTTGACGTAGGAGGTGGAAGTGGACTAAGTCTTGAAATGATAATCTCCAAGTACCCTTCAATAAAGGGTATTAATTTTGATCTGCCCCAAGTCATTGAAAATGCATCACCACTTCCAAGGATTGAGCATGTTGGTGGAGATATGTTTGCAAGTGTTCCAAAGGGTGACGCCATAATACTAAAGGCTGTATGTCATAATTGGTCAGATGAAAAATGTGTGGAATTTTTAAGCAATTGTGGCAAAGCATTGTCACCAAATGGGAAGGTGATTGTTGTGGAGTTCATATTGCCTGAAGAACCAGAACCAGCAGAAGAATCTCGACTTGTTTCCACTCTCGACAATCTTATGTTTATCACTGTTGGTGGAAGGGAAAGAACTCAAAAACAATATGAGAATTTGTGCAAACTCTCTGGATTTTCTAAATTTCAAGTTGCTTCTCGTGCTTTCTCTTGTTTGGGAGTGATGGAATTTTATAAATAA 597 0.3719 MEKDPKMNHIFNKAMADMCVTEIKRILEIYTGFEGISTLVDVGGGSGLSLEMIISKYPSIKGINFDLPQVIENASPLPRIEHVGGDMFASVPKGDAIILKAVCHNWSDEKCVEFLSNCGKALSPNGKVIVVEFILPEEPEPAEESRLVSTLDNLMFITVGGRERTQKQYENLCKLSGFSKFQVASRAFSCLGVMEFYK. 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07162 198 Pfam O-methyltransferase domain 2 179 IPR001077 GO:0008171
Seca8g07162 198 Gene3D Vaccinia Virus protein VP39 8 186 IPR029063 -
Seca8g07162 198 CDD AdoMet_MTases 38 135 - -
Seca8g07162 198 FunFam Caffeic acid O-methyltransferase 1 198 - -
Seca8g07162 198 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 195 IPR029063 -
Seca8g07162 198 PANTHER O-METHYLTRANSFERASE 3 188 IPR016461 GO:0008168
Seca8g07162 198 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 198 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07162 Seca-Chr8 167848079 167849812 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07162 4 188 Monolignol Biosynthesis Gene Families AT5G54160 54.839 4.51e-71 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07162 - - gmx:100787536 347.436