Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g07154 | ATGAACATGGGCAGGTATGAATACACAACCTCTTTCCTACGTACTTTACTCTTCTTTGGGTTCTGTCCTTTGGTTTTGTCTCTGCTGTCTCAAAACCAAACAAACACCATGATCAATCTCTCCCAACTTGTTAATGTCCCTGATTGGAGCAGCAGCAAAGACCCCAGTCCATGTTCATGGAAAGGGGTCAGCTGTGACCTTAGCAACTCATCTGTGCTCGAGATTATCCTATCTGGGTATTCTCTCTCTTCTCCAGAATTTCTCCATGTTGTTTGCAAGATTGAAACTTTGCAGCACCTTGATGTCTCAAACAACCGTATCAGCTCTATCCCAGATGAGTTCATTGCTGAATGTGGAAAGATTGAGCATATAAAGCTGCTGAATTTCAGTGGAAACGTGTTAAGTGGTGCTTTGCCTACTTTTCATGGTTTTGATGGATTGGAATCCCTGGATATGTCTTTCAATGACTTGAAAGGGAGTATTGGTTTACAGCTTGATGGATTGGCTAGCCTCAAGAATTTGAATCTCAGTAACAATGGCTTCACTGGGAATCTTCCTACCAACCTGGGAAGGTCTATGGTTTTGGAGCAGCTTCTGCTTTCAGCGAATCAGTTTGAAGGAACAATCCCAGATCAAATTTTGAGCTATAGAAATTTGACTGTGATTGATCTTAAGGAAAATAGGCTTATTGGGTCTATCCCTACCAATATTGGAAATCTATCCAAATTGGAATTTTTGAGTCTTTCCGCTAATGGACTCGTTGGGAAAATCCCAATAACACTCCTGAGCATAACAACCCTTACAAGATTCGCTGCAAATTTAAACTATTTCACTGGTGACATTCCTCCTGGAATTACAAAATTTCTCAAAAATTTGGATCTTAGTTATAATAATTTAGTTGGGTCCATTCCAGAAGACCTTTTATCTCCATCACAGCTCCAGGCTGTAGATTTGTCCTATAACAAGTTACGTGGGCTTTTACCTGCAAATATTTCTTCTAATTTAGTGAGGTTGAGATTAGGAGGAAATATGCTGCGTGGAGAGGTTCCTTCAGGTACTTGTGCAACCGTTCAAGCTTTGACATACATGGAGCTGGAAAACAATGAATTGTCAGGTTTGATACCTCCTGAATTGGGTTCTTGCCGGAAACTGGCCTTGTTGAATTTGGCTGGCAACCAATTGACTGGGGCATTGCCTCCAGAACTTGGCAACCTTAGCAATCTTCAAGTCTTGAAGCTTCAAATGAACAAGCTTAGTGGGACCATCCCAATTCAAATTACACAACTACACAAGTTGTCTACCCTGAATTTGAGCCGGAATTCTCTGGATGGATCAATTCCATCTGAAATGTCAAGCTTGATAAGCCTTACATTTCTGCACTTGCAAGAAAACAAGCTCAGCGGTTCTATACCCTCATCCATTAACAACTTGAGATCTCTTATAGAAGTCCAACTTGGGGCAAACCAGCTAAGTGGTAACATTCCACAGATGCCACTGAGTCTACAGATTTCCTTGAATCTCAGTAGTAACCACTTTAGTGGACCTATTCCTAGCAGTTTTGGTGATTTGACTAGCCTAGAAGTTTTGGATCTCTCAAATAACAGCTTTTCTGGCGAAATTCCTCAGGCTCTGACTAAAATGGCAGCATTGACACAGTTACAACTTTCAAACAATAATCTGACAGGTTTCATTCCAACATTTGCTCCTTATGTTAAAATCGATATAACAGGAAATAATGTCATGAACAATACTAATCCCCCACCCAATAGTTCTCCAACATCATCAAAGAAAGGGAAATCTGTTACTGTGGCTGTTCTTGTTGCAATTGCTGCTGCTATTTTTCTGGTTGGCCTGATCTCTCTGCTGGTTGTATCAATCTCACGACACTATTGCAGGGTGAATGATGAACACTTACACTCAGGGGAAGGTGAAAATGTTCAACTTCCTCAGGTCATCCAAAGTAACTTGTTAACTCCAAATGGGATCCATAGATCAAATATTGACTTCTCCAAGGCAATGGAAGCTGTTGCTGAAACATCAAACATTACTCTGAAAACCAGGTTTTCAACTTATTATAAGGCCATAATGCCATCTGGATCAGTCTATTCTGTCAAGAAGCTTAACTGCAGTGACAAGATATTCCCAGTGAGCAGTCTTGATAAATTTGGGAGAGAGCTAGATGTCTTGGCAAAGCTGAATAATTCAAATGTCATGACTCCTCTAGCCTATATTCTGTCCACTGGCAGTGCTTATATATTATATGAGTTTGTCTCAAATGGCTCTCTTTTTGATGTGCTTCATGGAAGCATGGGACACTCTTTAGATTGGGCAAGCAGATATAGTATAGCTGTTGGGGTGGCTCAGGGTCTCTCTTTTCTGCATGGATTTTCCTCTGGTCCAATACTTCTCCTTGACTTATCAAGTAAAAGTATTATGCTGAAATCCCTCAAGGAGCCTCTAGTTGGGGATATTGAACACTATAAGGTGATTGATCCCTCCAAGAGTACAGGGAGCTTTTCTGCAGTTGCTGGTTCTGTTGGCTATATTCCTCCAGAGTATGCGTACACAATGAGAGTGACAATGGCAGGGAATGTCTATAGCTTTGGGATCATTCTACTCGAATTGCTGACAGGCAAACCGGCAGTGACTGAAGGAACTGAATTGGTTAAATGGGTTTTGCGTAATTCAAGAAATCAAGATTACATTCTTGATTTTAATGCTAGTAGAGCATCACAGGCTGTCAGAAATCAAATGCTTGCAATTCTGAAGGTTGCTTTTGATTGTGTAAGCACATCCCCTGAGGCTAGACCAAAGATGAAGACTGTGCTACGGATGTTGCTAAATGCTAGATAA | 2853 | 0.409 | MNMGRYEYTTSFLRTLLFFGFCPLVLSLLSQNQTNTMINLSQLVNVPDWSSSKDPSPCSWKGVSCDLSNSSVLEIILSGYSLSSPEFLHVVCKIETLQHLDVSNNRISSIPDEFIAECGKIEHIKLLNFSGNVLSGALPTFHGFDGLESLDMSFNDLKGSIGLQLDGLASLKNLNLSNNGFTGNLPTNLGRSMVLEQLLLSANQFEGTIPDQILSYRNLTVIDLKENRLIGSIPTNIGNLSKLEFLSLSANGLVGKIPITLLSITTLTRFAANLNYFTGDIPPGITKFLKNLDLSYNNLVGSIPEDLLSPSQLQAVDLSYNKLRGLLPANISSNLVRLRLGGNMLRGEVPSGTCATVQALTYMELENNELSGLIPPELGSCRKLALLNLAGNQLTGALPPELGNLSNLQVLKLQMNKLSGTIPIQITQLHKLSTLNLSRNSLDGSIPSEMSSLISLTFLHLQENKLSGSIPSSINNLRSLIEVQLGANQLSGNIPQMPLSLQISLNLSSNHFSGPIPSSFGDLTSLEVLDLSNNSFSGEIPQALTKMAALTQLQLSNNNLTGFIPTFAPYVKIDITGNNVMNNTNPPPNSSPTSSKKGKSVTVAVLVAIAAAIFLVGLISLLVVSISRHYCRVNDEHLHSGEGENVQLPQVIQSNLLTPNGIHRSNIDFSKAMEAVAETSNITLKTRFSTYYKAIMPSGSVYSVKKLNCSDKIFPVSSLDKFGRELDVLAKLNNSNVMTPLAYILSTGSAYILYEFVSNGSLFDVLHGSMGHSLDWASRYSIAVGVAQGLSFLHGFSSGPILLLDLSSKSIMLKSLKEPLVGDIEHYKVIDPSKSTGSFSAVAGSVGYIPPEYAYTMRVTMAGNVYSFGIILLELLTGKPAVTEGTELVKWVLRNSRNQDYILDFNASRASQAVRNQMLAILKVAFDCVSTSPEARPKMKTVLRMLLNAR. | 951 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g07154 | 950 | Pfam | Leucine rich repeat N-terminal domain | 47 | 66 | IPR013210 | - | |
Seca8g07154 | 950 | PRINTS | Leucine-rich repeat signature | 523 | 536 | - | - | |
Seca8g07154 | 950 | PRINTS | Leucine-rich repeat signature | 97 | 110 | - | - | |
Seca8g07154 | 950 | ProSiteProfiles | Protein kinase domain profile. | 677 | 950 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g07154 | 950 | SMART | LRR_bac_2 | 357 | 378 | - | - | |
Seca8g07154 | 950 | SMART | LRR_bac_2 | 547 | 567 | - | - | |
Seca8g07154 | 950 | SMART | LRR_bac_2 | 94 | 113 | - | - | |
Seca8g07154 | 950 | SMART | LRR_bac_2 | 168 | 188 | - | - | |
Seca8g07154 | 950 | SMART | LRR_bac_2 | 310 | 330 | - | - | |
Seca8g07154 | 950 | Pfam | Leucine rich repeat | 96 | 157 | IPR001611 | GO:0005515 | |
Seca8g07154 | 950 | Pfam | Leucine rich repeat | 504 | 560 | IPR001611 | GO:0005515 | |
Seca8g07154 | 950 | Pfam | Leucine rich repeat | 406 | 466 | IPR001611 | GO:0005515 | |
Seca8g07154 | 950 | Gene3D | Transferase(Phosphotransferase) domain 1 | 757 | 950 | - | - | |
Seca8g07154 | 950 | FunFam | leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 | 757 | 950 | - | - | |
Seca8g07154 | 950 | Gene3D | Phosphorylase Kinase; domain 1 | 653 | 756 | - | - | |
Seca8g07154 | 950 | SUPERFAMILY | L domain-like | 43 | 328 | - | - | |
Seca8g07154 | 950 | SUPERFAMILY | RNI-like | 258 | 579 | - | - | |
Seca8g07154 | 950 | Gene3D | Ribonuclease Inhibitor | 28 | 188 | IPR032675 | - | |
Seca8g07154 | 950 | Pfam | Protein kinase domain | 688 | 944 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g07154 | 950 | SMART | LRR_typ_2 | 547 | 569 | IPR003591 | - | |
Seca8g07154 | 950 | SMART | LRR_typ_2 | 168 | 192 | IPR003591 | - | |
Seca8g07154 | 950 | SMART | LRR_typ_2 | 405 | 429 | IPR003591 | - | |
Seca8g07154 | 950 | SMART | LRR_typ_2 | 523 | 546 | IPR003591 | - | |
Seca8g07154 | 950 | SMART | LRR_typ_2 | 240 | 264 | IPR003591 | - | |
Seca8g07154 | 950 | SMART | LRR_typ_2 | 453 | 477 | IPR003591 | - | |
Seca8g07154 | 950 | SMART | LRR_typ_2 | 94 | 117 | IPR003591 | - | |
Seca8g07154 | 950 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 | 31 | 187 | - | - | |
Seca8g07154 | 950 | Gene3D | Ribonuclease Inhibitor | 189 | 288 | IPR032675 | - | |
Seca8g07154 | 950 | ProSiteProfiles | Leucine-rich repeat profile. | 96 | 117 | IPR001611 | GO:0005515 | |
Seca8g07154 | 950 | FunFam | Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 | 645 | 756 | - | - | |
Seca8g07154 | 950 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 217 | 946 | - | - | |
Seca8g07154 | 950 | Gene3D | Ribonuclease Inhibitor | 289 | 592 | IPR032675 | - | |
Seca8g07154 | 950 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 329 | 585 | - | - | |
Seca8g07154 | 950 | SUPERFAMILY | Protein kinase-like (PK-like) | 688 | 946 | IPR011009 | - | |
Seca8g07154 | 950 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 188 | 281 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g07154 | Seca-Chr8 | 167767379 | 167771028 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g07154 | 147 | 950 | Receptor kinase-like Gene Family | AT2G41820 | 38.369 | 5.27e-156 | 480 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Seca8g07154 | Pkinase | 1.7e-21 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g07154 | - | - | gmx:100796647 | 1226.08 |