Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07142 ATGAGAATCAACAGTAATGTGGAAGAGTCACAACAGATGGATGCAGAGAATGATTTGTTGCAAGGTTTGGATGATATGACCATTATTGATGAAGAAGTTGAAGAAAGTAGTGATGAGGAGGACAATGATCCTTGTGGTGAAACAGATGGTGAAGATAGTGGTGATGGAATGGAACGTGCTAATATGGAAGAAGCTATCAATATAGATAGTTTGCAGGACATTCGAAATTTGGATATGAAGAATATTAGCCCCGAAGATGTCAAGCGGTGTGATTTTGCTAACTTGGACCTTGCATATGAGTTCTATTCTGAATATGCAAAAGTGAACGGATTTTCTGTGAGGAAAAGCAAGGTGATTAAAAACTCTACGAAGGTTATTGTGCAGAAAACTTACCTTTGTCATAGGGAGGGGGAAAGGGATAAAAAGAGGCAAAACAATAAACCTAAGCATGAAGCAAAACGTAAAACAAGGTGTGGTTGTAAGGCAAGACTTCGAGTCCATGTTGACATCAATTCTGGTCGTTGGTATGTGACAATTTTTGATCATTTACACAACCATGAGATGCTAGGTGAAAGGCTTTGTGCCATGTTGCCAGCCCATAGGAAAATGAGTCCAGCAGATATAATGGAAATGAACAGCTTGAGAAATGTTGGGATAAGCACACCTGATATCTATGTTGCATTTGCAAGTCAATCAGGGGGATACCATAAGATTGGATTTCGAAAAAAAGACTTGTATAATCAGATTGGTAGACAGAGGCGTCTTCGAGCATCTGATGCTATAACAGCTATAGAGTACCTTGAAGGCCTTCGTGCACATGATCCATATTTGTACTACTGGCATACTGTTGATGAAGAAAATAGATTGCAACACCTTTTTTGGTGTGATGGTATTTGTCAAATGAATTACCAAGTTTTTGGTGATGTTTTGGCCTTCGATGCGACTTATGGCAAGAACAAATATCGATGTCCATTGGTGGTATTTTCGGGGGTCAATCACCATAACCGTACAACTATTTTTGCTAGTGCAGTTGTTGCTAATGAGACGGAAGACACATATGTGTGGCTGCTTCAAAAATTTAATGAAGTTATGAAAGGAAAGTCACCAAAATCAGTCATTACAGACGACGATATGGCCATGAGGAATGCAATAAAAAGAGTATTTCCAAATGCTCATCACCGCTTATGTGCTTGGCACTTACTTCGCAATGCCACCAGTAATGTTGGAATTCCTGATTTTATTTCTGATCTAAAGAGGTGCATGTTCAGTAATATTGATGTGGCGAAATTTCAAATCCGATGGGACCAAATGGTGTCTAAATTTGGCTTGGAAGATCATTGTTGGGTGAAAGAGTTATATGAGAAGCGAAAGATGTGGGCCTCAGCACATATCAGAGGTAATTTTTTTGCTGGACTAAGAACCACATCTCGATGTGAAAGTCTACATGCTCAACTTGGTAAGTTTGTGAAGTCACGGAATAACCTTACAGAGTTTATTCAACATTTCCAACGTGCCCTTAATTACATGAGATTTAAGGAAGAAGAAGATGACTTTGCCTCTGTTTTTGGTGAGGTTGTGTTGAATACAGATTACCATCCATTAGAGCGGTCAGCATCTAAGCACTTCACAAGCCAGATTTTTTTAATGTTTCGTAAGGTGTTGGAGAAAACATCTCAGATTATTGTAGTTGGTTGTAGAGAGGCAGTAATGTGCTCCATATACACCATTTCAAAATATCAGGGTGGTGGAAGAGAGTGGTATGTGTCATTTTACTCACCAACTATTGAGTTCACATGCACTTTCCAGAAAATGGAATGCTATGGACTTCCTTGTGAGCACATAATGGCTGTTTTGGTGTATTTAGATGCTACCGAAATCCCAAAGTCTTTAATTCTGGATAGGTGGACCAAGATTGCTAAGGAGTCAATTCGTGGATCTTTCAGTGATGCTTCTTATTTTTGGGACTCTCAATTGATGGCTCGATATGTGTCACTACTTGAGCTATGTAGACAATTGTGCAACCTAGCACATCATGACGATGAAGATTTTAATCATATTAGAGAGATCATAACTTCTGAAATACAAATTCTGAAAGATAAGCATGGTGCACAATTCGCCTAA 2121 0.3894 MRINSNVEESQQMDAENDLLQGLDDMTIIDEEVEESSDEEDNDPCGETDGEDSGDGMERANMEEAINIDSLQDIRNLDMKNISPEDVKRCDFANLDLAYEFYSEYAKVNGFSVRKSKVIKNSTKVIVQKTYLCHREGERDKKRQNNKPKHEAKRKTRCGCKARLRVHVDINSGRWYVTIFDHLHNHEMLGERLCAMLPAHRKMSPADIMEMNSLRNVGISTPDIYVAFASQSGGYHKIGFRKKDLYNQIGRQRRLRASDAITAIEYLEGLRAHDPYLYYWHTVDEENRLQHLFWCDGICQMNYQVFGDVLAFDATYGKNKYRCPLVVFSGVNHHNRTTIFASAVVANETEDTYVWLLQKFNEVMKGKSPKSVITDDDMAMRNAIKRVFPNAHHRLCAWHLLRNATSNVGIPDFISDLKRCMFSNIDVAKFQIRWDQMVSKFGLEDHCWVKELYEKRKMWASAHIRGNFFAGLRTTSRCESLHAQLGKFVKSRNNLTEFIQHFQRALNYMRFKEEEDDFASVFGEVVLNTDYHPLERSASKHFTSQIFLMFRKVLEKTSQIIVVGCREAVMCSIYTISKYQGGGREWYVSFYSPTIEFTCTFQKMECYGLPCEHIMAVLVYLDATEIPKSLILDRWTKIAKESIRGSFSDASYFWDSQLMARYVSLLELCRQLCNLAHHDDEDFNHIREIITSEIQILKDKHGAQFA. 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07142 706 MobiDBLite consensus disorder prediction 25 51 - -
Seca8g07142 706 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 88 686 IPR031052 GO:0006355
Seca8g07142 706 MobiDBLite consensus disorder prediction 136 156 - -
Seca8g07142 706 Pfam MULE transposase domain 309 403 IPR018289 -
Seca8g07142 706 Pfam FAR1 DNA-binding domain 100 188 IPR004330 -
Seca8g07142 706 MobiDBLite consensus disorder prediction 1 17 - -
Seca8g07142 706 ProSiteProfiles Zinc finger SWIM-type profile. 591 622 IPR007527 GO:0008270
Seca8g07142 706 MobiDBLite consensus disorder prediction 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07142 Seca-Chr8 167704539 167709382 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g07142 MULE 6.8e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07142 - - tpra:123913749 756.518