Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07136 ATGACTGATGGGAATTTGAGGGACTGTTTAGATGGAGTTTCTGGAAAATATATAGATTGGGATGCCCGTGTTATGATTGTAATAGGAGCTGCAAGGGGCTTGGAATATCTTCATGAAGTAGCTGCTCCAAGAATTCTTCATAGAGATGTCAAATTAACTAACATTCTTTTGGATGAAAATTGGCAAGTATAG 192 0.375 MTDGNLRDCLDGVSGKYIDWDARVMIVIGAARGLEYLHEVAAPRILHRDVKLTNILLDENWQV. 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07136 63 ProSitePatterns Serine/Threonine protein kinases active-site signature. 45 57 IPR008271 GO:0004672|GO:0006468
Seca8g07136 63 Gene3D Transferase(Phosphotransferase) domain 1 1 63 - -
Seca8g07136 63 PANTHER OS01G0253100 PROTEIN 1 62 - -
Seca8g07136 63 ProSiteProfiles Protein kinase domain profile. 1 63 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07136 63 SUPERFAMILY Protein kinase-like (PK-like) 1 63 IPR011009 -
Seca8g07136 63 Pfam Protein tyrosine and serine/threonine kinase 1 62 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07136 Seca-Chr8 167629476 167629667 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07136 1 62 Receptor kinase-like Gene Family AT2G28250 69.355 2.75e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Seca8g07136 PK_Tyr_Ser-Thr 8.4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07136 - - gmx:100817870 115.546