Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07116 ATGCCGCCTGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAAGAGAGGAAGCACGAGAGGTCGGAATCGCTTGGGTCCGTGGCGAGATGGAGAGATTCGTCTCATCACCGAGACTTCAATCGGTGGGGGTCAGCCGAGTTCCGCAGACCGCCAGGTCATGGTAAGCAAGGTGGTTGGCACCTGTTTTCCGAAGAATCTGGTCATGGGTATGCAGTTTCTCGGTCCAGTGACAAGATGCTGGAGGAAGATAGTCGGCCATCGATCTCACGGGGGGATGGAAAATATGGCAGGAGCAGTAGGGAAAATAGAGGTCCCTTTGGCCAGAGAGATTGGAGAGGCCATTCATGGGAAACCGCCAATGGCTCTCTAAATGTGTCCAGGAGGCCACCGGATGTGAATAATGACCAGAGGTCACTTGATGATGCCCTAACATATTCCTCTCATCCTCATTCTGATTTTGTAAACACTTGGGATCAGCACCACTTGAAAGACCAGCATGATAAGATGGGTGGTGTCAATGGGTTGGGAACAGGCCCAAGATATGATAGAGAGAATTCTCTGGGTTCAATTGACTGGAAGCCACTTAAATGGACCCGTTCTGGCAGCTTGTCTTCCCGAGGCTCAGGTTTTAGCCACTCAAGTAGCTCAAGGAGTTTGGGTGGAGCAGATTCATATGAAGCAAAGGCTGAGTTGCAACCCAAAAATGCAACTGCTAATGAGACGCATTCAGGGGAAGCTGCTGCATGTGTGACATCTTCTGCGCCATCTGAAGATACAACTTCCAGAAAGAAGCCTAGGCTAAATTGGGGTGAGGGACTTGCAAAGTATGAGAAGAAAAAAGTTGAGGGACCTGATATAGGTTCAAACAAAGATGGCCCTGTGTTGTCTACTAGTAATATGGAACCTTGTAATTTCCTCACTTCTAACTTAGCAGATAAAAGCCCAAAAGTTACAGGATTTTCAGATTGTGCATCTCCTGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCAGAACCTAACTTCAACCTTGTAGCAGGTGTGGATGATAAATTATTTGGAAAGACTACAAATGTGGAGAATGATGTTAGTAATTTGGCCGGTTCACCTGCTCCTGTGTCTCAAAATCATCTGCAGACATTTTCTTTTAACTTAGATAAATTGGATATTGACTCCTTGAATAATTTGGGCACTTCAATAAATGAATTAGTACAATCTGATGGTCCAAGTTCTGTTGATTCTGGTCTAGTGAGGTCCAATGCAATTAGTAAGTTGCTGATATTGAAAGCTGGCATTTCAAAGGTATTGGAGACGACTGAATCTGAAATTGATATGCTTGAAAATGAACTGAAGTCACTAAAATCTGAATCTGGGGATAGATGTCCATGTCCAGCAGCATTGTGCTCCCAGCTGGAAGGTATCAATGAAAAATCATTTGAAGAACTTGTTGGAGTCTCTCATAAGGTCACTAGGCCAGTGCCTTTGAAAATTGTTTCTTCTGATGAACCCAATGTAGATAAGATGCATCAGTCAACTAATTTAGATAGTATTCATGAAAATGGCAAGGAAGACGATATTGATAGTCCTGGAACAGCAACTTCTAAATTTGTTGAGCCTCTGCCTTTGATTAAAGCAGTTTCTTCATGTTATACTGGGGGATATGGTGACTTCTCTGCGGACTTGGATGCTGTTCAGTCTACAGACATAAAATGCTTAGTCCCCTGTACTACTAGGAAAGTTGCTATCATATCTACTGGTGGTGATGGCAATACATCTATGGAGGTAAAGGATAGCATGGATGCTGCCACTGGAGCAAGCTTATGTTCTAGCTATGAGGATACTTATAATACAATTATTTCTTCCAATAAAGAAACTGCGGACAGAGCGCATGGAGTATTTGCTAAGTTATTGCCCAAAGAATGTTGTAAGATTGATGATATGGGAGCCATCAGTGACTCATGCTCTGATACATTGATTTTGGAAAAATTAGCAGAGAAAAAGCGGTTTGCAAGATTTAAGGAGAGAGTTATCACACTTAAGTTCAAAGCCTTGCATCACCTGTGGAAAGAAGATATGCGCTTACTGTCTATTAGGAAATCCCGCCCAAAATCATCTCACAAGAAAAATGAACTAAGTGTGCGAACTACCTGTAATGGTAATCAGAAGAATCGATCCTCCATTCGTTCACGTTTTCCTTTCCCTGCAGGAAATCATCTAAGCTTGGTTCCAACATCAGAAATAATTAATTTTACAAGCAAATTGCTCTCAGAATCCCAAGTTAAAGTTCAGAGAGACTCCCTGAAGATGCCAGCATTAATTTTGGATGAAGAGGAGAAGGTGACTTCAAAATTCATATCTAGTAATGGGCTGGTTGAAGACCCATTGGCTATTGAGAAAGAAAGGGCTATGATCAATCCTTGGACATCTGAAGAGAGGGAAATTTTCTTGGAGAAGTTTGCTGCCTTTGGAAAAGATTTTCGGAAAATTGCTTCTTTCCTTGACCACAAGACAACTGCTGACTGTGTTGAATTCTACTACAAGAATCATAAATCTGATTGTTTTGAGAAACTTAAGAAGCAAGGTGTCGGTAAGCTAGGGAAGGCGTTTTCAGCTAAAACTGACTTGGTGATGTCTGGTAAGAAATGGAATCGTGAAGTGAATGCTGCTTCACTTGAGATTTTGAGTGCAGCTTCAGTGATGGCGGATGGCATTGCAGGTAATAAAAAAATGCGTTCAGGAGGTTTCCTTTTGGGGGGATATAGTAATGTGAGAACATCAAGGGGTGAAGACAGCATCATGGAGAGATCAAGCAGTTTTGACATTCTTGGGGATGAAAGAGAGACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGTTCTCTTTCATCTGAGGCCATGAGTTCCTGCATCACAAGTTCAGTTGATCCTGTAGAGGGTCACAAGGATAGGAAGTTCCTAAAAGTGGGCCCTTTATGCAAACAACCCTTGACACCTGATGTTACTCAGAATGTTGATGATGAGACTTGTTCAGATGAGAGCTGTGGTGAAATGGATCCTTCTGATTGGACAGATGATGAGAAGGCAGCTTTTCTTCAGGCTGTATCATCTTTTGGCAAGGATTTCACAAAGATAGCACGGTGTGTAGGAACAAGGTCCCAAGAACAGTGCAAAGTTTTCTTCAGCAAGGCTCGCAAATGCCTTGGATTGGATCTTGTGCACCCCATTCCTGAAAATGTTGGGTCCCCAGTGAATGGTGATGGAAATGGTGGTGGGAGTGACTCAGATGAAGCATGTGTTGTTGAGACAGGTTCTGTGGTTGGCACTGATAAGTCTGGCACTAAAACAGATGAGGACCTGAACACATACCATGATGAATCCAATCCTGTGGAAGCTAGGAACCTGTCATCTGAATTAAATGAATCAAAGGATGTTAATGGGACAGTAGATCTTGAAGATGTAAATATGGTGTCTGGTGCTTGCGCAATTAAGGTTGAATCTAAACTGGGATCTGATGTCAGTGAAGCTGTCTTGTGTAGTGCTGATAAGTCTGGTTCAATCAGTGGACAAGCAGCTATAGTTGTGTCAGATAGCATAGAAGTTGGAAAAGATAGAGCAAAGAAATTGGGAGGTGCAGGTACTGAAGTGATTTCTGCTCCAGGGACAATTGAGTCACACAAGTGTACTTCTGTTGCTGTGGATACACTGGTTTCTGAGGTTTCTTCTGGGGGTCTTGGAAATGAATTGGAGAGGCAAAGAGATGATAAACATGAAGCTGAATGTCTTGATGACAGAGATGATAAACATGAAGCTGATACAGGTGTTGTAGTTGAATTGAAAAGCTCTGTGCAAGATTCAAGTACTACGGTAAATGCTTCACTCTCATCTGTGGGCAATTCTTCAGGATTGAGTTTTGATACTGAAAATAAGCATGTGTCCCTTGGAAAGCCTCATATCTCAGCATCGTCTGTGACTGTGAAGGAACTTCATGCCACTGCAAATTCGTTGTTGCAAAATGCTGCTGCTGCTGATGTTCAGTGTGAGAAGACAAGTAGCCAAGATCAACAGTCCTCTACTTGTGATATCCAGGGAAGTAGAGATATGCGTTGTCATAACTCCATTAGCAATGGTGACCATCAGCTTCCTATTCCCGGGAACCAAGTTGAGGCTGCTAGCATCCTCCAGGGCTATCCCTTGCAAGTGCCAATTAAGAAAGAAGTGAATGGAGATATGAATTGCAGCAGTTCAGCAGCTGAGTTGCCTCTTCTGTCCCCAAAGATTGAACAGACCGATGATCATTTCAAAACAATGTTACGCCATTCCTCAGATTCAGAAAAAACATCCAGAAATGGTGATGTGAAACTATTTGGGAAGATATTAACCAATCCTTCATCCACTCAGAAACCTAATTTGACTAAGGGAAGTGAAGAAAATGGTACCCATCATCCCAAGAATAGCAACAAGGCTTCTAGTCTGAAATATACTAGCCATCATAACAACACTGATGGAAATTTGAAAATTTTGAAGTTTGACCGCAATGACCGTAATGATTATCTTGGCCTTGAAAATGTTCCCATGAGGAGTTATGGTTTTTGGGATGGTAACAGAATACAGACTGGTCTCTCATCATTGCCTGATTCTGCCATCTTGCTAGCAAAATATCCTGCTGCCTTCAGTAATTACCCTACATCTTCTGCCAAATTGGAGCAACAGTCATTGCAGGCATTTGCCAAGAATAATGAAAGGCACCTGCATGGTGCATCCGCATTTTCAACTAGAGACATCAATGGCAGCAATCCTGTGATTGATTATCAGATGTTTAGAAGTAGGGATGGTCCTAAAGTGCAGCCATTTATGGTAGATGTCAAGCACTGCCAAGATGTATTCTCTGAGATGAATAGAAGAAATGGTTTTGAAGCAATCTCTGGTTTGCAGCAGCAGGGAAGAGGAATGATGGGAATGAACAGTGTTGGAAGACCGGGGATTCTTGTGGGAGGATCATGCAGTGGTGTCTCAGATCCTGTGGCAGCAATCAAAATGCACTATTCCAATGCTGACAAGTATGGTGGTCAGACCGGGAGCATTGTGAGAGAGGATGAACCATGGGGAGGGAAGGGGGAAATAGGAAGGTAG 5136 0.4291 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHRDFNRWGSAEFRRPPGHGKQGGWHLFSEESGHGYAVSRSSDKMLEEDSRPSISRGDGKYGRSSRENRGPFGQRDWRGHSWETANGSLNVSRRPPDVNNDQRSLDDALTYSSHPHSDFVNTWDQHHLKDQHDKMGGVNGLGTGPRYDRENSLGSIDWKPLKWTRSGSLSSRGSGFSHSSSSRSLGGADSYEAKAELQPKNATANETHSGEAAACVTSSAPSEDTTSRKKPRLNWGEGLAKYEKKKVEGPDIGSNKDGPVLSTSNMEPCNFLTSNLADKSPKVTGFSDCASPATPSSVACSSSPEPNFNLVAGVDDKLFGKTTNVENDVSNLAGSPAPVSQNHLQTFSFNLDKLDIDSLNNLGTSINELVQSDGPSSVDSGLVRSNAISKLLILKAGISKVLETTESEIDMLENELKSLKSESGDRCPCPAALCSQLEGINEKSFEELVGVSHKVTRPVPLKIVSSDEPNVDKMHQSTNLDSIHENGKEDDIDSPGTATSKFVEPLPLIKAVSSCYTGGYGDFSADLDAVQSTDIKCLVPCTTRKVAIISTGGDGNTSMEVKDSMDAATGASLCSSYEDTYNTIISSNKETADRAHGVFAKLLPKECCKIDDMGAISDSCSDTLILEKLAEKKRFARFKERVITLKFKALHHLWKEDMRLLSIRKSRPKSSHKKNELSVRTTCNGNQKNRSSIRSRFPFPAGNHLSLVPTSEIINFTSKLLSESQVKVQRDSLKMPALILDEEEKVTSKFISSNGLVEDPLAIEKERAMINPWTSEEREIFLEKFAAFGKDFRKIASFLDHKTTADCVEFYYKNHKSDCFEKLKKQGVGKLGKAFSAKTDLVMSGKKWNREVNAASLEILSAASVMADGIAGNKKMRSGGFLLGGYSNVRTSRGEDSIMERSSSFDILGDERETAAAADVLAGICGSLSSEAMSSCITSSVDPVEGHKDRKFLKVGPLCKQPLTPDVTQNVDDETCSDESCGEMDPSDWTDDEKAAFLQAVSSFGKDFTKIARCVGTRSQEQCKVFFSKARKCLGLDLVHPIPENVGSPVNGDGNGGGSDSDEACVVETGSVVGTDKSGTKTDEDLNTYHDESNPVEARNLSSELNESKDVNGTVDLEDVNMVSGACAIKVESKLGSDVSEAVLCSADKSGSISGQAAIVVSDSIEVGKDRAKKLGGAGTEVISAPGTIESHKCTSVAVDTLVSEVSSGGLGNELERQRDDKHEAECLDDRDDKHEADTGVVVELKSSVQDSSTTVNASLSSVGNSSGLSFDTENKHVSLGKPHISASSVTVKELHATANSLLQNAAAADVQCEKTSSQDQQSSTCDIQGSRDMRCHNSISNGDHQLPIPGNQVEAASILQGYPLQVPIKKEVNGDMNCSSSAAELPLLSPKIEQTDDHFKTMLRHSSDSEKTSRNGDVKLFGKILTNPSSTQKPNLTKGSEENGTHHPKNSNKASSLKYTSHHNNTDGNLKILKFDRNDRNDYLGLENVPMRSYGFWDGNRIQTGLSSLPDSAILLAKYPAAFSNYPTSSAKLEQQSLQAFAKNNERHLHGASAFSTRDINGSNPVIDYQMFRSRDGPKVQPFMVDVKHCQDVFSEMNRRNGFEAISGLQQQGRGMMGMNSVGRPGILVGGSCSGVSDPVAAIKMHYSNADKYGGQTGSIVREDEPWGGKGEIGR. 1712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07116 1711 Coils Coil 430 457 - -
Seca8g07116 1711 MobiDBLite consensus disorder prediction 1 271 - -
Seca8g07116 1711 MobiDBLite consensus disorder prediction 235 259 - -
Seca8g07116 1711 MobiDBLite consensus disorder prediction 513 530 - -
Seca8g07116 1711 MobiDBLite consensus disorder prediction 116 154 - -
Seca8g07116 1711 Pfam Myb-like DNA-binding domain 1022 1063 IPR001005 -
Seca8g07116 1711 Pfam Myb-like DNA-binding domain 807 848 IPR001005 -
Seca8g07116 1711 SUPERFAMILY Homeodomain-like 791 851 IPR009057 -
Seca8g07116 1711 SUPERFAMILY Homeodomain-like 1021 1070 IPR009057 -
Seca8g07116 1711 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1024 1073 IPR017930 -
Seca8g07116 1711 MobiDBLite consensus disorder prediction 155 169 - -
Seca8g07116 1711 CDD SANT 1024 1062 IPR001005 -
Seca8g07116 1711 ProSiteProfiles SANT domain profile. 803 854 IPR017884 -
Seca8g07116 1711 MobiDBLite consensus disorder prediction 1485 1499 - -
Seca8g07116 1711 MobiDBLite consensus disorder prediction 506 534 - -
Seca8g07116 1711 MobiDBLite consensus disorder prediction 8 45 - -
Seca8g07116 1711 ProSiteProfiles SANT domain profile. 1022 1070 IPR017884 -
Seca8g07116 1711 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1708 - -
Seca8g07116 1711 MobiDBLite consensus disorder prediction 1460 1475 - -
Seca8g07116 1711 MobiDBLite consensus disorder prediction 76 111 - -
Seca8g07116 1711 MobiDBLite consensus disorder prediction 1107 1130 - -
Seca8g07116 1711 MobiDBLite consensus disorder prediction 1113 1127 - -
Seca8g07116 1711 Gene3D - 994 1076 - -
Seca8g07116 1711 MobiDBLite consensus disorder prediction 199 222 - -
Seca8g07116 1711 SMART sant 1020 1068 IPR001005 -
Seca8g07116 1711 SMART sant 804 852 IPR001005 -
Seca8g07116 1711 MobiDBLite consensus disorder prediction 1459 1499 - -
Seca8g07116 1711 Gene3D - 784 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07116 Seca-Chr8 167382031 167392708 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Seca8g07116 Myb_DNA-binding 8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07116 - - gmx:100810588 2567.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07116 8 167382031 167392708 Seca8g07116 8 167382031 167392708 ECH