Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07094 ATGCGGTCAATTCCTCTGGGAACCTCACTATCTCCAACTCCTTTAAACTCCTCAAAAATCTCACCTTTCAATATTAATTGCAAGAAATCAAGCTCTTTCCCATCTTGGGTTTCATCTCCATCTCATGATTTCTCTTTCCTTTCTCTCTCCAAATCAGGATTATGTAGAGCCAGTCAAATTGTTGATTTGTTCCCAACTGTGTCTCCTGAAATTATTGTCCGGGAGGCAAGGTTAGAGGACTGTTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTCCCTGAATATTCCTTCCCATTAGATTTTGTGTTGAGGATGGACAGAATGGTGGCTATGTTAGCAGGATTCTCTATACCAAATGGTTGCAAAAGAACCTGTTTGGTTGCTGTTATTGGCAGCTCACTTGATCAAACTTTCTTATTTGGAAGTGAAGATTTCAAGATTGGTGGTTTTGATGGGAAATTTAGCCTCAACAAGGGATATGTAGCTGGCATATTAACAGTAGATACTGTTGCAGACTTTCTACCTAGAAAGGGGCCACTGAGACAGAGAAGGACTGGAATTGCATACATATCAAATGTGGCAGTGAGGGAAAAATTTAGGCAAAGAGGAATAGCTAAACAATTGGTAGCAAAGGCAGAATCACAAGCCAGAAGTTGGGGGTGTCGTGCCATTGCATTACACTGTGATTTGAGAAACCCTGTGGCTACAAAGTTATATCAAGGCCAAGGTTTCAAATGTATAAAGGTTCCTGAAGGAGCTAAGTGGCCTCAACCAAAGACCTCACCGGATATTAAGTTTAATTTTATGATGAAGCTTCTCAACAAATCAGCTGCTTCTAAATCTAATTAG 852 0.4096 MRSIPLGTSLSPTPLNSSKISPFNINCKKSSSFPSWVSSPSHDFSFLSLSKSGLCRASQIVDLFPTVSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRMVAMLAGFSIPNGCKRTCLVAVIGSSLDQTFLFGSEDFKIGGFDGKFSLNKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRQRGIAKQLVAKAESQARSWGCRAIALHCDLRNPVATKLYQGQGFKCIKVPEGAKWPQPKTSPDIKFNFMMKLLNKSAASKSN. 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07094 283 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 71 272 - -
Seca8g07094 283 Gene3D - 67 249 - -
Seca8g07094 283 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 278 - -
Seca8g07094 283 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 71 276 IPR000182 GO:0016747
Seca8g07094 283 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 66 262 IPR016181 -
Seca8g07094 283 Pfam Acetyltransferase (GNAT) family 160 245 IPR000182 GO:0016747
Seca8g07094 283 CDD NAT_SF 187 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07094 Seca-Chr8 166982870 166985339 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca8g07094 Acetyltransf_1 1.6e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07094 - - adu:107467912 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07094 8 166982870 166985339 Seca8g07094 8 166982870 166985339 ECH
Seca10g05124 10 117234453 117241699 Seca8g07094 8 166982870 166985339 PCT