Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07082 ATGGAAATCACAATCACATCAAGAGAAACAATCAAACCATCCTTGCCCACACCAGATGATCACAGATTCTTCCAACTCTCTCTGTTTGATCAGCTTCAACTAGTCACCTATTTGCCAATGGTTTTATTTTACCCCAAAAAGGAAGGCCTCCCAGAACCCTCCCATGTTATTGCTCAATTGAAAAAATCACTGTCTGAGACACTAACCATTTTCTACCCTATAGCAGGGAGAAGAAAAGATCACACCTTTATCACTTGCAATGATGAAGGGGCTCTTTACTTAGAAGCCAATGTGAACCATAACATGGCTGAGTTCCTCACACCACCTAAGCTAGAATTTCTAAACAAATTACTTCCATGTGAGCCTAATAAGATGCACAAAAATAGAGAAGTGTTACCCCAAGTACTTATACAAGTGAACACATTTAGTTGTGGTGGAATAGCTATAGGTACATGCAATCTTCACACCCTCCTTGATGGTTGTTCTGGCAGCCTCTTCCAAACTACTTGGGCTGCTATATGCCGTGGCTCTAGAGAGGAAGTACCAAACCCTGATTTCTGTTCTGCTTCTTCTTTCTTTCCACCAGTGAGTCATTTGAGTTTGCATGATCATGTTTCTCAGAATAATGAGGACAAAGATATACAAAAAAAGTGCTCTACGAGAAGATTTGTGTTTGATGCAGAATCCATCAATACTCTTAGAGCTGAAGCAAAAGATGATAATGATGAAAGCTTAAAATCTCCTACAAGATATGAAGCACTAGCTGCTTTCATTTGGAAACATATGACACTTGCATGCAAGATGGAATCTGGTGATAGCACAAGATCAGCAGTGGCTATTCATATTGTGGATATGAGGAGGAGGATGGGTGAACCTTTCTCTAGATACACCATAGGCAACATTTTGTGGCCAGTAATGGTATTTTGTGAAACAGTCTATGCAGACACTGATATTAGATATTTGGTTAGCATTGCCAGAGAGAAATTTGGAAAGCTCTCTAGGGAATTGTTTTTAAGAGTGAAAAGTGATCCAAATATTCTAGGGAGCAATGAGTGTGTGGATATGCCTCAAGGTATAGAAACAAGAAGTCCAATTCCAATTGTGTTGACAAGTTGGTGTGGTTTGAATTTTGATGAGCTAGATTTTGGTTGGGGGAAGCCTTTGTGGGCTGGTGTTAGAGGAGGTGATCAGGAAACTCTCCCCAATGTAGCTGTTATCATGGAAACAGATGCAGGCATGGAAGCTTGGCTGACAATGGAAGTGCAGCATATAGCTATGTTGGAAAAAGATATGGAGTTTCTCAAATTAGCTTTGCCTAATCCAAGTGTTCCAAACATATAA 1341 0.4004 MEITITSRETIKPSLPTPDDHRFFQLSLFDQLQLVTYLPMVLFYPKKEGLPEPSHVIAQLKKSLSETLTIFYPIAGRRKDHTFITCNDEGALYLEANVNHNMAEFLTPPKLEFLNKLLPCEPNKMHKNREVLPQVLIQVNTFSCGGIAIGTCNLHTLLDGCSGSLFQTTWAAICRGSREEVPNPDFCSASSFFPPVSHLSLHDHVSQNNEDKDIQKKCSTRRFVFDAESINTLRAEAKDDNDESLKSPTRYEALAAFIWKHMTLACKMESGDSTRSAVAIHIVDMRRRMGEPFSRYTIGNILWPVMVFCETVYADTDIRYLVSIAREKFGKLSRELFLRVKSDPNILGSNECVDMPQGIETRSPIPIVLTSWCGLNFDELDFGWGKPLWAGVRGGDQETLPNVAVIMETDAGMEAWLTMEVQHIAMLEKDMEFLKLALPNPSVPNI. 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07082 446 Gene3D - 215 436 IPR023213 -
Seca8g07082 446 Pfam Transferase family 1 433 - -
Seca8g07082 446 PANTHER F21J9.9 4 435 - -
Seca8g07082 446 Gene3D - 1 205 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07082 Seca-Chr8 166778370 166779710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07082 60 429 Monolignol Biosynthesis Gene Families AT5G48930 24.422 1.91e-22 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07082 - K13065 gmx:102668997 773.081