Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07078 ATGTGCAAGTCCAAAAGGAGCACCAGCGTGATACAACCCAAAAACAGAAACATGAACATGAACAAGAACAAGAACAGCCCTCGTCCTCAAAGATCACGAACAACCTTAACATCTTCATCGTCGAATTTCCCATCTTCTACCAGCGAAGTCCCCATCACAGAATCAAGAAGCTACGTTTATGGCGAAAAAGAATGGTCCAAATCTTCTTCTATCTCAAGCCACGCCTCTCTTTCCAGCCTCAAAGACACTCTCCCCGAAAACCCTCATATCTACCACTTCTCCGAGATATCTGCCGCCACTGGAAACTTTTCCGTCCCCCGCCTCTCTTCTTCCTCCTGGCGTTGTTCTATTCGCGACCGCGACGTTGTCGTTTTCCAGCGCAAGTTCCGTCGCCAAATGGACCTGTCGGAGCTCCGTCACCGGCTCGCCCTAATTTGCCGGAACCACCACAGCAGCCTCGTCAAACTCCTCGGAGCCTCCGTCTCCGGCAATTACATTTACCTCGCCTATGAATTTGTCCCCGGCGTTAGTCTCGCCGATTGCCTTCGCAATCGCCGGAACCCTAGCTTCACCGATCTCTCCACGTGGACATCGCGGATGCAGATCGCTTCCGATCTCGCTCACGGACTCGATTACATCCACAATTTCTCGGGCTCGGGTTCGGGTTTCGTCCATAACCATATCAAGAGCTCCAGCATCGTCGTCGCCGAGGGGGATTTCAGCGCCAAGATCTGCCACTTCGGCACGTCGGAGCTGTGCGGCGAGGCAGTCGAAGTTGCAGGCGAGCCGTCCAGATCGGATTCCGGCAGGGGATTGCGGAGGTCCGGTAGCCGGACGGTGAGGTTCGAGGGGACGAGGGGGTACATGGCGCCGGAATTTCAAGTCACCGGCGTGGCGACGCAGAAGACGGACGTGTACGCGTTCGGTGTGGTGGTTCTGGAGCTGCTGAGCGGGAACGAAGCGGTGAGGTTCGAATTCGACGATGACGGCGGTTACAGGAGGGAGAGCGTGGTGGATACGGCGAGTACGGCGGTGGAGGAGCACGGTGGCGTGAGGAAGTGGGTGGATAATAGGCTGAGGGATTCGTTCCCGGTGGAGGTCGCCGAGAAAATGATTCGGGTCGGGTTAGAATGTGTGGGCGAAGACCCGAACGAGAGGCCGGATATGGGTCGGGTTTCAATTGAGGTGTCCAAGTTGTATTTGGAGTCCAAGAAGTGGGCTGAGAAAATGGGAACTAACATTGACTTGTCGGTCTCGTTGGCCCCACGGTGA 1272 0.5574 MCKSKRSTSVIQPKNRNMNMNKNKNSPRPQRSRTTLTSSSSNFPSSTSEVPITESRSYVYGEKEWSKSSSISSHASLSSLKDTLPENPHIYHFSEISAATGNFSVPRLSSSSWRCSIRDRDVVVFQRKFRRQMDLSELRHRLALICRNHHSSLVKLLGASVSGNYIYLAYEFVPGVSLADCLRNRRNPSFTDLSTWTSRMQIASDLAHGLDYIHNFSGSGSGFVHNHIKSSSIVVAEGDFSAKICHFGTSELCGEAVEVAGEPSRSDSGRGLRRSGSRTVRFEGTRGYMAPEFQVTGVATQKTDVYAFGVVVLELLSGNEAVRFEFDDDGGYRRESVVDTASTAVEEHGGVRKWVDNRLRDSFPVEVAEKMIRVGLECVGEDPNERPDMGRVSIEVSKLYLESKKWAEKMGTNIDLSVSLAPR. 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07078 423 Pfam Protein kinase domain 136 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07078 423 ProSiteProfiles Protein kinase domain profile. 92 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07078 423 MobiDBLite consensus disorder prediction 1 49 - -
Seca8g07078 423 SUPERFAMILY Protein kinase-like (PK-like) 125 394 IPR011009 -
Seca8g07078 423 Gene3D Transferase(Phosphotransferase) domain 1 174 418 - -
Seca8g07078 423 Gene3D Phosphorylase Kinase; domain 1 62 172 - -
Seca8g07078 423 PANTHER OS09G0572100 PROTEIN 1 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07078 Seca-Chr8 166697627 166698959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07078 86 413 Receptor kinase-like Gene Family AT1G51940 32.059 4.71e-42 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Seca8g07078 Pkinase 2.8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07078 - - mtr:11414164 595.119