Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07074 ATGAACTCAAAGCATTTCGTGGTGCTTCTTTGGTTGCTCATTGTGGTTTTGAAGTGCCATTGCCAAGAGATTAATGACTATGACCAAATTGATAACCCTGCTGTTCTTCCTCTTATCACTCAGCTTGTTTATAGTCGAATTTCCAATTTGACTTCACTTCTCAATCAAGAAATAACCAGAGACTCCACTTTCTGTGTCAAAAATCCGGATTCTGATTGGAATCAAGCATTTAATTTTTCATCTGATTTGAGCTTCTTGACTTCTTGCATTAAGAAGACTAAAGGAGATATTACGAAACGCTTATGTACAGCAGCAGAAGTGAAGTTTTACTTAAATAATTTATTGGAGAAATCTACAAGTGCCAATTATTTAAAGCCTAACAACAACTGCAATTTAACCTCGTGGGTCTCTGGTTGCGAGCCGGGATGGGCCTGTAGTGTCCACTCAAGCCAGAAGATTGACCTTAAAAATTCAAAAGAGATACCAGCAAGAACTTCAAACTGTCAAGCATGTTGTGAGGGCTTCTTTTGTCCTCATGGTATCACATGCATGATACCATGCCCTCTAGGTTCCTATTGCCCTCTTGCTACACTCAATAAAACAACTGGCATATGTGAACCATATCTTTATCAATTGCCTCCAATGCAGCCAAATCATACCTGTGGAGGAGCAAATATTTGGGCAGACATAAGTAGCAGTGGTGAAATGTTTTGCTCAGCAGGATCATATTGTCCAACAACGACGAAAAGAATTCCTTGCAGTAGTGGGCATTATTGCAGGATGGGTTCCACATCTGAGAAAAGATGCTTCAAGTTGAGTTCATGTAATTCAAACACAGCAACCCAAAATATGCATGCATATGGAATTATGCTCATTGCTGCCTTGAGTACTTTGCTACTCATTATTTACAACTGTTCTGACCAAGTTCTCACTACTAGGGAAAGGAGAATCGCCAAATCTAGAGAAGCAGCAGCTAGAAGTGCAAAGAAGACTGCAAATGCACACCAAAGATGGAAATTTGCAAAAGATGCTGCTAAGAAGGGTGCAACTGGGCTACAAGCTCAACTATCACGCAAACTCTCTCGTAAGAAGGAAACAGCACATCTGGGAAAATTTAAAATTTTGAATCAAGAAACTTCTGAAACAGATGTTGAATTGTTGTCACATTCACAACCTATCACTTCAAGCATGGTTGCAAGTTCATCTGTGGTGCCGAGGGAAAGTGGAAAAAAACCAAGTGGCCTAATGCATATAATGCATGAAATTGAAAATGATCCAAATATTAATGACAACCCTACTATAGAAATAGAAACTAGAGATAAAAGTGTTACAGGAAATGTGTCAAAGGGAAAACAGCCGCATACTCATACCCAAATTTTTAAGTACGCATATACTCAACTTGAAAAAGAGAAGGCTCAGCAACAAGAAAACAAGAACCTTACCTTCTCAGGAGTCATTAAAATGGCTACAAACACTGAAAAAAGGAAAAGGCCTTTTATTGAGATTTCTTTCAAAGATCTGACTCTTACATTGAAAGCTCAAAACAAACATATATTGAGAAATGTTACTGGGAAAATTAAACCTGGCCGCATTACTGCTGTCATGGGTCCATCAGGGGCTGGCAAGACAACATTGCTTTCAGCTCTAGCTGGAAAGGCATTTGGATGCTTGGTTACTGGTTCAATTCTTATAAATGGAAGGAATGAATCAATTCACTCCTTTAAGAAAATTATTGGCTTTGTGCCACAAGATGATGTAGTTCATGGAAACCTGACAGTGGAAGAGAATCTCTGGTTCAGTGCACAATGCCGGCTATCAGCTGACTTGTCAAAACCAGAAAAAGTTCTGGTTGTTGAAAGAGTTATTGAATTCTTGGGGCTTCAATCTGTGCGGAATTCCTTAGTTGGAACTGTGGAAAAGCGAGGGGTCTCTGGAGGCCAAAGGAAGCGTGTAAATGTTGGATTGGAAATGGTTATGGAACCTTCACTTTTGATCTTGGATGAACCCACCTCTGGCTTGGACAGTGCATCATCTCAGCTACTCCTAAGAGCACTAAGACGTGAAGCTCTTGAGGGAGTGAATATTTGCATGGTGGTTCACCAACCCAGCTATGCTTTGTTCAAGATGTTTGATGACTTGATACTTCTGGGTAAAGGTGGTACTGTCTATCATGGATCTGCCAAGAAAGTTGAAGAATACTTTTCAGGCCTGGGGATCAATGTTCCGGAGCGGATTAATCCTCCAGATTACTTCATTGACATTTTGGAGGGTATAGTAGTACCTGGTGGAAGCTCAGGACTCAGTTATAAAGAACTTCCAATTAGATGGATGCTTCATAATGGATATCCAATACCTCTTGATATGAGGCAGAATGCAGAACAATTTGATATGTCCCAAAGTGTAAATTCAGCTAATGAAATAGATCATGATGGATCTGGTAATGTGGAAAAAACCTTTGCTGGAGAATTATGGCAAGATGTGAGAAACAATGTGGAACTGCAAGGGGAGAAGATAAGGTTCAATTTTTTGAAATCCAAGGATTTGTCTGACCGGAAAACTCCTGGTGTATTCAAGCAATATAAGTACTTTCTTATACGGGCTGGGAAGCAGCGATTACGGGAAGCTAGGATCCAAGCCATAGATTATCTTATTTTGTTACTTGCTGGAGCCTGCTTAGGATCACTTACCAAAGCAAGTGATCAAACGTTTGGTGCAGCTGGGTACACCTATACGGTGATTGCTGTATCTCTTCTGTGCAAAGTAGCGGCCTTGAGATCATTTTCTCTGGATAAATTACACTACTGGAGGGAGAGTGATTCTGGCATGAGTAGCTTGGCTTATTTTCTTTCCAAAGACACAATTGATCATTTTAATACAGTTATCAAGCCTGTGGTGTACCTCTCTATGTTCTATTTCTTCACCAATCCAAGATCTACTTTTGGAGATAATTATGTTGTGCTGCTTTGTCTTGTGTACTGTGTGACTGGCATAGCATATGCATTGTCCATACTTTTTGAACCTGGTGCAGCCCAGCTGTGGTCAGTACTCCTTCCTGTCGTTTTGACTCTTATTGCAACACAACCAAAAGATAATAAAATTTTGAAGGATATAGCTAATTTATGCTACTCTAAGTGGGCTTTACAAGCATTTGTTATTGCAAATGCTGAAAGGTACCAGGGAGTGTGGCTCATAAGTCGTTGTGGTTCACTTTTGAAAAGTGGCTATGATATTCATGATTGGAGTCTGTGCATATCCATCCTCATCCTTATGGGTGTAATTGCCCGGGCAATAGCATTTTTCTGTATGGTCACCTTCCAAAAGAAGTAA 3327 0.4004 MNSKHFVVLLWLLIVVLKCHCQEINDYDQIDNPAVLPLITQLVYSRISNLTSLLNQEITRDSTFCVKNPDSDWNQAFNFSSDLSFLTSCIKKTKGDITKRLCTAAEVKFYLNNLLEKSTSANYLKPNNNCNLTSWVSGCEPGWACSVHSSQKIDLKNSKEIPARTSNCQACCEGFFCPHGITCMIPCPLGSYCPLATLNKTTGICEPYLYQLPPMQPNHTCGGANIWADISSSGEMFCSAGSYCPTTTKRIPCSSGHYCRMGSTSEKRCFKLSSCNSNTATQNMHAYGIMLIAALSTLLLIIYNCSDQVLTTRERRIAKSREAAARSAKKTANAHQRWKFAKDAAKKGATGLQAQLSRKLSRKKETAHLGKFKILNQETSETDVELLSHSQPITSSMVASSSVVPRESGKKPSGLMHIMHEIENDPNINDNPTIEIETRDKSVTGNVSKGKQPHTHTQIFKYAYTQLEKEKAQQQENKNLTFSGVIKMATNTEKRKRPFIEISFKDLTLTLKAQNKHILRNVTGKIKPGRITAVMGPSGAGKTTLLSALAGKAFGCLVTGSILINGRNESIHSFKKIIGFVPQDDVVHGNLTVEENLWFSAQCRLSADLSKPEKVLVVERVIEFLGLQSVRNSLVGTVEKRGVSGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFKMFDDLILLGKGGTVYHGSAKKVEEYFSGLGINVPERINPPDYFIDILEGIVVPGGSSGLSYKELPIRWMLHNGYPIPLDMRQNAEQFDMSQSVNSANEIDHDGSGNVEKTFAGELWQDVRNNVELQGEKIRFNFLKSKDLSDRKTPGVFKQYKYFLIRAGKQRLREARIQAIDYLILLLAGACLGSLTKASDQTFGAAGYTYTVIAVSLLCKVAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFFTNPRSTFGDNYVVLLCLVYCVTGIAYALSILFEPGAAQLWSVLLPVVLTLIATQPKDNKILKDIANLCYSKWALQAFVIANAERYQGVWLISRCGSLLKSGYDIHDWSLCISILILMGVIARAIAFFCMVTFQKK. 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07074 1108 Gene3D - 500 736 IPR027417 -
Seca8g07074 1108 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 502 743 IPR003439 GO:0005524
Seca8g07074 1108 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 240 1095 - -
Seca8g07074 1108 SMART AAA_5 528 720 IPR003593 GO:0016887
Seca8g07074 1108 ProSitePatterns ABC transporters family signature. 643 657 IPR017871 GO:0005524|GO:0016887
Seca8g07074 1108 FunFam ABC transporter G family member 24 496 737 - -
Seca8g07074 1108 Pfam ABC transporter 519 671 IPR003439 GO:0005524
Seca8g07074 1108 Pfam ABC-2 type transporter 700 1108 IPR043926 GO:0140359
Seca8g07074 1108 CDD ABCG_EPDR 500 725 - -
Seca8g07074 1108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 502 735 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07074 Seca-Chr8 166673546 166682736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07074 490 703 Calmodulin-binding Proteins AT2G36910 27.397 5.27e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07074 - - gmx:100775464 1919.82