LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca8g07032	ATGACTGAAGAATGTGCTGGAAATACAATTGCAACCTCTACTACTACCCCATTAAACTGGTGGTATCTCCAGGCAAATTCTCTTCCTTCCTGGAATGATACTAAACACACATGGAACAACCAAATAAACCCAAACTCTTCCTCTTCTTGTGAAGAGGATATATCATCTTTCACTAATGCTTCCAACCATTCAAGCCTCACCGTTGAATCCTCTCGTAGACTCGTTGATCCACCTGCTCCTTCCTCCAACGAGTTGATGGGAGAAGTACATGCTTCAGATAATCAACTTTGGAGCCATGTTCTATCAGGTGTTGGATCCAATGGGGAGTTGCACAACAACCATCAAGAAATTGGAGAGAATTTTCTGGATGCACTGTCAACTAAAAGCATGGCAAGTGGTATGTTTGAACCAGCATGTGATTACTTGAAGAAACTTGATACAAGTTGGGAATATAGTGCAGGTTCAACTTCATTCAATAGTTTTGAGAAGCACTTAAATGGGTTTAGTGAGGCCCTAATTGAGAATAATGAAAGGTTGACTAAGTTATCTAATCTTGTAAGCACTTGGTCTATTGCCCCACCTGACCCTGAAGTCAGTAGTAGCCACTTTGATCCACAAACAAACAATAACATGTCTTTGAATTCTTCCATGGATCATCACCACTACCCACAATCTGACCCTTTTGGAGGTGGAGGAGCAAGTAATAATAAAAATTCTGGAGGAGCACTGTTACCTTGCTATGATCATCATCATGAGGATCACATGAAGGTGAAACAAGAATATCATCATGCAAGTGAAGTAATAGCAAATAATGGATATCAAAATGGATTCAATAATAGCCTTTCAATTGGAGATAGTGGCAAATTTTACCATGGTGGTGGGTTGCCTAATCTTTCACCATGCACAAGAAATTTCTCAGATGTTATATCATTTAACAGCCGGTTAGGAATTAGGCCACTTCTTGGAGGAATCCATGCACAGAGGCCTAATAATTTCAAATACTTAAACCAATCTGAATCAAAGAAACAAGCTGGCCTTCAAACACCATCACCACCGACAAGAACTATTAATGGAAGAGGAGAGGGAATTACAACACGTGAAGTAAAGAAGAAAAGATCTGAAGAATCATCAGAAGCAATCTTGAAGAAGCCTAAGCAAGATACATCAACAACTTCTTCTTCAAAGGTACATACATATATATTATATATAAAATGGTCATGCTAA	1224	0.3889	MTEECAGNTIATSTTTPLNWWYLQANSLPSWNDTKHTWNNQINPNSSSSCEEDISSFTNASNHSSLTVESSRRLVDPPAPSSNELMGEVHASDNQLWSHVLSGVGSNGELHNNHQEIGENFLDALSTKSMASGMFEPACDYLKKLDTSWEYSAGSTSFNSFEKHLNGFSEALIENNERLTKLSNLVSTWSIAPPDPEVSSSHFDPQTNNNMSLNSSMDHHHYPQSDPFGGGGASNNKNSGGALLPCYDHHHEDHMKVKQEYHHASEVIANNGYQNGFNNSLSIGDSGKFYHGGGLPNLSPCTRNFSDVISFNSRLGIRPLLGGIHAQRPNNFKYLNQSESKKQAGLQTPSPPTRTINGRGEGITTREVKKKRSEESSEAILKKPKQDTSTTSSSKVHTYILYIKWSC.	408

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca8g07032	407	MobiDBLite	consensus disorder prediction	363	382	-	-
	Seca8g07032	407	MobiDBLite	consensus disorder prediction	61	80	-	-
	Seca8g07032	407	MobiDBLite	consensus disorder prediction	339	392	-	-
	Seca8g07032	407	MobiDBLite	consensus disorder prediction	339	360	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca8g07032	Seca-Chr8	166022869	166026350	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca8g07032	31	393	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT1G31050	28.682	6.70e-10	58.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca8g07032	-		-	gmx:100527800	523.857