Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07029 ATGACTAACACTATGATAATTTTCTTATTTCGGATGCTATTGCTACCAGATAGAGGAATGTCGAGATTTCAATCAGAAAATCATTTGTCAGCCTCTGAGGGTGAAAATACTTTTGTGGACTCGAAGAAATCTGAGCTACCTGGATATGCTGTTTTAAATACATCTAAAGGCTCTATAATAGTAGAATTGTACAAGGAAAGCGCTCCAGAAGTTGTTGATGAATTCATTGACTTATGTCAAAAAGGGCACTTCAAGGGGATGCTTTTTCACCGTGTAATTAAACACTATGTGATTCAGGCAGGGGATAGCCAAGGAACAGGAGCTACTGAAGATTGGAACTTGAAAGGAAAGCAAACTACAAGGTTTTCTTATTCTTTTGGTTTTTGCAATTTAAGTTTCTGA 402 0.3682 MTNTMIIFLFRMLLLPDRGMSRFQSENHLSASEGENTFVDSKKSELPGYAVLNTSKGSIIVELYKESAPEVVDEFIDLCQKGHFKGMLFHRVIKHYVIQAGDSQGTGATEDWNLKGKQTTRFSYSFGFCNLSF. 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07029 133 SUPERFAMILY Cyclophilin-like 45 112 IPR029000 -
Seca8g07029 133 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 51 111 IPR002130 GO:0000413|GO:0003755
Seca8g07029 133 Gene3D - 27 126 IPR029000 -
Seca8g07029 133 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 21 121 - -
Seca8g07029 133 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 46 133 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07029 Seca-Chr8 165990412 165994999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07029 42 107 U-box Gene Family AT5G67530 39.394 2.57e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07029 - - gsj:114403810 191.43