Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07010 ATGGCTTCATCGATTAGACTAGACTGTAATTTTCTCTTTGAATTCGTAGTGCGCAACAGGAAGTATGAGAAATTAGCTGACGTGGATGAAGAGTTCATTTCAGAATATTCCAGCCAAGTAGGTGAGTTTTGGACAGTGAAAGATCCTAAAGGACAGTTACATACGATACGCTACAAATACAATCGTCGTTTGGATCGACCTAGGATCATTGGTGGGTGGATGGAACTAAGGCATTTTTATAGCCTTCAGGGAAATTGCTTAGTGTTGTTCCGTTACCTTGGTGGTTCCGAATTCAACATTTACATTCTTGACCACAACAAAAAGCAGATAAGTTACGATTATTCCCCTGCTCCAATCCAAATCCACCCACCATTTTCATCTTCCTACATTGCTCAATGCAACATCCAATTAACCACTACCATGGTCACCGGATATAAATTGACATTGCCTCCTCAAATTGGTGCATTAGTGAGGAGGTCAGGTTCTCAAAAGTACCACTTGATTGGACCCAGTGGCCATAATATTAGATGTAATGTGTTTGCCCCCAAAAATCAAGGTTCTACAAAGCTTGGAAATGGCTGGAGGATTTTCTGCCGAGTCAATGAAGTTCAGGCTAATGACATTCTTACTTTCAAGTTTACAAGTCTAGAAGATGGAATAGTGCATGTCTTTATTGAGCGTCCTATAGCTTGA 693 0.4055 MASSIRLDCNFLFEFVVRNRKYEKLADVDEEFISEYSSQVGEFWTVKDPKGQLHTIRYKYNRRLDRPRIIGGWMELRHFYSLQGNCLVLFRYLGGSEFNIYILDHNKKQISYDYSPAPIQIHPPFSSSYIAQCNIQLTTTMVTGYKLTLPPQIGALVRRSGSQKYHLIGPSGHNIRCNVFAPKNQGSTKLGNGWRIFCRVNEVQANDILTFKFTSLEDGIVHVFIERPIA. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07010 230 ProSiteProfiles B3 DNA-binding domain profile. 132 229 IPR003340 GO:0003677
Seca8g07010 230 Pfam B3 DNA binding domain 137 224 IPR003340 GO:0003677
Seca8g07010 230 CDD B3_DNA 45 104 IPR003340 GO:0003677
Seca8g07010 230 SUPERFAMILY DNA-binding pseudobarrel domain 29 106 IPR015300 -
Seca8g07010 230 Gene3D - 9 107 IPR015300 -
Seca8g07010 230 Gene3D - 131 227 IPR015300 -
Seca8g07010 230 SUPERFAMILY DNA-binding pseudobarrel domain 135 225 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07010 Seca-Chr8 165732831 165733966 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Seca8g07010 B3 4.7e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07010 - K14616 vun:114169435 85.5001