Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07009 ATGCTGATTCGGAGGAGGGTGATGAGCTGGAGAAGGGTGGCCAAGTCTCTCCAAGCTCTGCTAGCTCATGTCCTGCTCTTCTCCTTCACTCTTCTTCTTGCCCTCAAGCTTGACCATCTAGTCCTTTGCTCATGGTGGACTGTATTTTTCCCTCTATGGTGTTTTCATGCTGTGGTAGCACGGGGAAGGTTTTCCTTGCCTGCTCCTGCGATGCCTCATGATCGCCAATGGGCTCCATGTCATGCAGTCATAGCAACACCACTACTTGTTGCATTTGAGCTACTTCTTTGTATACATCTTGAGAGCAATTACGTGGTGAATTTAAAGATTGTCTTCATACCTCTGATTGCTTTTGAACTGATGATTTTGGTTGATAATATCAGGATGTGTAGAGCTTTGATGCCTGGAGATGATGAAAATTTGACTGATGAAGCAGTATGGGAAACTCTTCCTCACTTCTGGATTTCGATATCCATGGTCTTCTTTATTGCTGCTACAGTGTTCACCCTTCTAAAGATAACCGGTGATGTTGCTGCACTAGGCTGGTGGGACTTATTTATTAACTTCGGCATTGCACAGTGCTTTGCGTTTCTTGTTTGTACAAAGTGGCACAATCCAATAATTCATGGAAACTGTCACATTACAGAACCATGTTCATCGTCAAATAGCATAACATACCTGGACTGGAGTAGGGGAGGCATAGTTGTTTCTGTAGATGAAGATAGGCAGCAAAATGGGTTATGCAGTCTGCAGGACATTGGCGGGCATATTATGAAAATTCCATTTATTGGTTTCCAAATACTTCTTTTTATGCATTTAGAGGGAACACCATCAAGTGCAAAAGATATACCAAACTGGGTCATTTTTTCTCCCCTTTTTTTGTTGCAAGGAGCTGGGGTTTTATTTGCAACATATAGATTTATAGAGAAGATAGTTCTTTTACTCTATAGTGGAGATATTCCTAGAAGCTACACATCTATAGCATCTAAATCCCGTGACTGCTTTGGGTTCTTGCATCGTGGGCCAAGATTGCTAGGTTGGTGGTCAATAGATGAAGGAAGTAAAGAGGAAGAAGCAAGACTTTATTGTGCTGGGAGTTCTGGGTATAATACTTTCTCTCCTGATACAGTGAAGAAAATGCCTAGAGCAGATCTTGTTGAAGAGATCTGGAGACTACAAGCTGCACTGGGTGAGCAAACAGAAGTTACAAAACATAGCCAGGAGGAGTATGAAAGACTTAAAAATGACAAGATCTTATGTAGAGTTTGCTTCGAAGAGCAGATTAATGTGGTCCTACTTCCCTGCAAGCATCACATTCTTTGCCAGTAA 1329 0.4199 MLIRRRVMSWRRVAKSLQALLAHVLLFSFTLLLALKLDHLVLCSWWTVFFPLWCFHAVVARGRFSLPAPAMPHDRQWAPCHAVIATPLLVAFELLLCIHLESNYVVNLKIVFIPLIAFELMILVDNIRMCRALMPGDDENLTDEAVWETLPHFWISISMVFFIAATVFTLLKITGDVAALGWWDLFINFGIAQCFAFLVCTKWHNPIIHGNCHITEPCSSSNSITYLDWSRGGIVVSVDEDRQQNGLCSLQDIGGHIMKIPFIGFQILLFMHLEGTPSSAKDIPNWVIFSPLFLLQGAGVLFATYRFIEKIVLLLYSGDIPRSYTSIASKSRDCFGFLHRGPRLLGWWSIDEGSKEEEARLYCAGSSGYNTFSPDTVKKMPRADLVEEIWRLQAALGEQTEVTKHSQEEYERLKNDKILCRVCFEEQINVVLLPCKHHILCQ. 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07009 442 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 8 442 - -
Seca8g07009 442 Pfam Transmembrane Fragile-X-F protein 35 295 IPR019396 -
Seca8g07009 442 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 395 442 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07009 Seca-Chr8 165719959 165727686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07009 8 442 C3H Transcription Factor Family AT1G73950 63.883 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07009 - - gmx:113000756 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07009 8 165719959 165727686 Seca8g07009 8 165719959 165727686 ECH