Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07002 ATGCAAACCCACTCTTTCTCCTGCATATCCTCTTGTGGGAGTGAGAGTGCTTGCTTAGAAGCTGATGAGGTTGATGATGAAGAGTCCATCTCCCTCTCCCTTTCCCTTCCTGGCTACCAAATACCAAAAGTTTCAACCCAAAAAAACCACCCTTCTACTACTATGCCACCCCTTCAAAATCAAAACCCTACATCTAATAATGACCAGAGTGGTGTAACTGTTGCCCTTCACATTGGCCTCTCCACCACTGCACCAACCACCACCAATAGCAAACCTGACCATTCCTCTTCAACTCCGATTCAGGGTCACCAATATTGGATCCCTACTCCTGCACAAATCCTAATAGGACCCACCCAGTTTTCTTGCTCAGTCTGCAACAAAACATTCAACCGTTTCAACAACATGCAGCAGATGCATATGTGGGGACATGGATCACAATATAGGAAAGGACCAGAGTCATTGAAAGGGTCAAAACCAGCTTCTTCAATGTTGAGGCTTCCTTGCTATTGCTGTGCTGAGGGTTGCAAGAACAACATAAACTATCCAAGGTCAAGGCCACTCAAGGATTTCAGAACCCTCCAAACACACTACAAGAGGAAGCATGGAGGGAAGTCATTTGAATGCAGGAAGTGTCAAAAACCATTTGCTGTGAGAGGAGATTGGAGGACACATGAGAAGAATTGTGGGAAGCTTTGGTTCTGCATCTGTGGTTCTGATTTCAAACACAAGAGATCCCTTAAAGATCATGTCCGTGCATTTGGCAATGGCCATGCTCCACACACCTTGAGTAGTTGTAATGATCAGTTAGATGATAACAGTGAAGTGGCTGTTGTAACTTTCAATTAA 846 0.4456 MQTHSFSCISSCGSESACLEADEVDDEESISLSLSLPGYQIPKVSTQKNHPSTTMPPLQNQNPTSNNDQSGVTVALHIGLSTTAPTTTNSKPDHSSSTPIQGHQYWIPTPAQILIGPTQFSCSVCNKTFNRFNNMQQMHMWGHGSQYRKGPESLKGSKPASSMLRLPCYCCAEGCKNNINYPRSRPLKDFRTLQTHYKRKHGGKSFECRKCQKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGNGHAPHTLSSCNDQLDDNSEVAVVTFN. 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07002 281 MobiDBLite consensus disorder prediction 41 70 - -
Seca8g07002 281 FunFam Zinc finger protein WIP2 175 257 - -
Seca8g07002 281 PANTHER ZINC FINGER PROTEIN WIP2 46 271 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07002 Seca-Chr8 165609780 165611123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07002 26 263 C2H2 Transcription Factor Family AT1G13290 69.038 1.56e-116 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca8g07002 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07002 - - aprc:113870355 399.438