Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07000 ATGAGGAGGAGGGGTAGTGGTAGTAACTCGTCACCAAGAGCAGTGCTTCTGGAAGACAAGCCTGCATGGCTAGAGAATCTTATTAACACAGGCCCTGTGTGTCAAAGTTGTGGGGTCCATGACACGAACATGTTTTGCTTGCACTGTAATCTTAGCATATGCTCATACTCCCGCTGCCTCCGTCCTCACGGCTCCCACCTCCGCCTCCAGGTGACAAGGTGGCGTAACCAAGAGGTGGTTGAATTGGCTGGTTTGAAAAAGCTCATCGATTGTTCTGATATTAAGTCATACGCAACCAAAATTGGCGATGCGATAGTTTTAAAATGGAGCGAGCAAGAGTCAGGCCGAGGGCCTTCCAAAGCACACACTTGCCTGCACTGTGGCAAGAATATTAATAGTCGACTGCGGTTCTGGGAACAATACAGCTATTGTTCTCTCTCATGCAAGGTTGAGTATCAAATAGTTCGGGGTATGCCCTTGTCAGCTAGCATTTTACATCGATTCACCAATGAATTAAGAGTCGATAACTCAGAGGCTATTAATGAAGATGTCCCTGGTTCTTCACGCCCTAATAACAACAGGATCACATCCTGCATATCTTGGAGGAAGTTACGTTGGAGGAGAAAGACCACTCCTCGAAGAGCTCCTTTTTTTTAA 657 0.4658 MRRRGSGSNSSPRAVLLEDKPAWLENLINTGPVCQSCGVHDTNMFCLHCNLSICSYSRCLRPHGSHLRLQVTRWRNQEVVELAGLKKLIDCSDIKSYATKIGDAIVLKWSEQESGRGPSKAHTCLHCGKNINSRLRFWEQYSYCSLSCKVEYQIVRGMPLSASILHRFTNELRVDNSEAINEDVPGSSRPNNNRITSCISWRKLRWRRKTTPRRAPFF. 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07000 218 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 18 171 - -
Seca8g07000 218 Pfam PLATZ transcription factor 76 150 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07000 Seca-Chr8 165568225 165569617 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca8g07000 PLATZ 1.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07000 - - ccaj:109804478 118.627