Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06985 ATGGATCAGGAAAGGTTGAATAGAGATGATGTAGTGAGCAGCCTAAGGATGAGCATTGGATCTTCTAGCAGCAGGAGGAGTTGGGCCTCAGCAAGTGTTCCTGAGGTGTTTGAGAGAAGCAGGAGCACAAGGGAAGATGATGATGAAGACCTCAAATGGGCAGCTATAGAGAGGCTTCCCACTTTTGAAAGGATGAGGAAAAGCATAGTGAAACAAGTTTTAGAGAGTGGAAGATTCAATTATGAGGAGGTTGATATATCCAACCTTGGTATGCAGGAAAAGAAGAAACTCCTTCATGCTATACTAAGGACTGTTGAAGAAGACAATGACAAATTTCTCTGTAGGATGAGGGAGAGGATTGATAGGGTGGGTATAGAGATCCCAAAGGTGGAAGTCCGATTTGAAAATTTGTTTGTAGAAGGGGATGCATTTATTGGAAACAGAGCACTGCCAACGCTAGTAAATTCCACCATGAATGCGATAGAGAGAGTTCTTGGATCAATCAAGCTTCTCCCCTCAAATAAAAGTGTTGTCAAGATACTTCAAGATGTTAGTGGAATCGTTAGGCCAGCAAGAGTGACATTGCTTTTGGGGCCTCCAGGAGCGGGAAAAACTACACTACTGCAGGCACTTGCAGGGAAACTGGACAGGGATTTAAGGGTAGCAGGAAGAGTCACTTACTGTGGTCATGAGCTATCAGAGTTTGTTCCTCAAAGAACATGTGCATATGTTAGTCAACATAATCTTCATCATGGAGAGATGACAGTCAGAGAAACACTGGACTTTTCTGGACGCTGTTTGGGAGTTGGAACAAGGCATGATTTACTAGTGGAACTGACAAGGCGAGAAAAGCAAGCAGGAATCAAACCAGATCCAGAGATAGATGCTTTCATGAAAGCCACGGCAATGGAAGGTCAAGAAACAAGTCTCATTACAGATTATATTCTTAAGATTCTTGGATTGGAAATATGTGCGGATGCTTTGGTGGGAGATGAGATGAGAAGGGGAATATCTGGTGGAGAACAAAAGCGGTTAACTACTGGTGAGATGTTAGTAGGACCTGCAAGAGTTTTCATAATGGATGAGATTTCCACTGGTTTGGATAGTTCCACAACCTTCCAAATTGTCAGGTTCTTGAGGCAGCTAGTTCATATGATGGATGTTACAATGATTATCTCTCTTTTACAACCTGCACCAGAAACATTTGAACTTTTTGATGACATAATCTTACTTTCAGAAGGTCAGATTGTCTACCAAGGTCCACGTGAGAATGTTCTCAATTTTTTTGAGAGTGTAGGTTTCAAATGCCCAGAAAGGAAAGGAGTTGCAGACTTCTTACAGGAGGTTACTTCCAGAAAGGATCAAGAGCAGTACTGGTTCATAAGGGACAAACCTTACCATTATGTCAGTGTGCCTGAGTTTGTGGCTCAATTCAACAATTATAGCATTGGTCAAAAACTTTCTGAAGAGCTTCAGGTTCCTTATGGCCGTGCAAAAACTCATCCTGCTGCATTGGTTAAGGATAAATATGGGATCTCAAAGCCAGAACTCTTCAAGGCATGCTTTGCAAGAGAGTGGCTGCTGTTTAAGCGCAGTGTTCTTATATATGTATTTAAGACTACTCAGATTATGATAATGGCTTTGATTACTATGACAGTGTTTTTTAGAACAGAAATGAAACATGGCCAACTTGATGATGGGAGAAAATATTATGGTGCACTATTCTTCAGTCTCATTAATGTGATGTTCAATGGAATGGCTGAGGTTGCATTGACTATTCTTAGACTTCCTGTTTTCTTCAAACAGAGAGATTCATTGTTTTATCCAGCATGGGCTTTTGCACTGCCCATATGGATCTTCCGAATCCCTCTCTCTTTTGTGGAGTCAGGATTATGGGTTGTCCTTACTTATTACACTGTAGGGTTTGCTCCAGCTGCAAGTAGATTTTTTCGTCAGTTATTAGCATTCTTCTGCGTTCATCAAATGGCTTTGTCTCTATTCCGTTTCATTGCTGTTCTTGGAAGAACACAAGTTGTGGCAAATACACTTGGTACTTTTATACTGCTACTTGTTTTTGTACTTGGTGGGTTCATTATCGCCAAAGATAGCATTGAACCGTGGATGATGTGGGGCTATTATGCTTCTCCTATGATGTATGGTCAGAATGCCATTGCCATCAATGAATTCCTTGACAAGAGATGGAGTGCTCCCAATGTGGACCCAAGAATTCCTGAACCCACAGTAGGGAAGGCTCTTCTCAGGGCTAGAAGCATGTTTACAGAGGACTATTGGTATTGGATTTGTGTTGGTGCTCTCTTAGGCTTTTCTCTGCTTTTCAACATTTGTTTTATTGTTGGTCTGACATTTCTGAATCCATTTGGAGATTCTAAATCTATTATTCAGGAGGATGAAAACGAGAAAAAGGGAAACACAAGGGAGAGTTCTGTTTCAACTGCTAAAACATTTGAACATGCAGACATTGAAATGACAGAAAGAAACACCCCAGATACTTCAATTCCCAAAGCAGGCACTGCAACAACCAAGAGGGGAATGATGTTACCCTTTAGGCCCCTATCAGTTGCTTTTGATCATGTGAATTACTACATTGATATGCCAACTGAAATGAAAAAACAAGGAGTTGAAGAGAGTCGGCTCCAATTACTAAGAGATGTCAGTGGTGCTTTCAGGCCTGGAGTACTAACAGCATTAGTAGGTGTAACTGGTGCTGGAAAAACCACACTGATGGATGTTCTTGCTGGAAGAAAAACTGGTGGTTATATTGAAGGAAGCATCACCATATCTGGTTACCCAAAGAACCAAGCAACTTTTGCTCGAATAAGTGGATATTGTGAACAAAATGATATCCATTCCCCAAATGTGACAGTCTATGAATCTCTTTTGTTTTCTGCTTGGCTACGTCTTGGTAAGGAGGTCAAGAGAGAAACACAGAAGATGTTTGTTGAGGAAGTTATGAAACTTGTTGAGCTACATCCAGTGAGGAATTTTATAGTAGGCCTTCCTGGCATAAATGGTTTATCAACTGAACAAAGAAAGAGACTCACCATTGCTGTAGAATTGGTTGCCAATCCTTCTGTCATCTTTATGGATGAACCGACCTCAGGCCTGGATGCTAGAGCCGCAGCTATTGTAATGCGTACTGTCAGAAATACAGTAGATACAGGGAGAACTGTAGTCTGCACAATTCATCAACCAAGCATTGACATATTTGAGGCTTTTGATGAGCTGCTTTTAATGAAGAGAGGAGGACAAATCATATATGGTGGTCCCCTCGGTCCCCAATCTCAGAAGCTCATAGAGTACTTTGAGGCTATTCCAGGAGTTCCTAGAATCAAAGATGGATATAATCCTGCCACATGGATGTTGGAGATCAGTTCTCCATTAATTGAGTCTCAGCTTAGTGTAGACTTTGCAGAATTGTACATTAAGTCAGAATTGCATCAGAGGAATCAAGAACTTATTAAAGAGCTAAGCACACCGCCACCAGGAACAAAGGATCTTAATTTCCCTACAAAATACTCGCAGTCCGTTGTTACTCAATGTAAAGCTTGTTTCTGGAAACAGCAATGCTCCTACTGGAGGAACCCACAGTATAATGCCATCCGGTTCTTCTTGTCAATATGTGTAGGTGCTATTTTTGGACTCATTTTCTGGAGAAAAGGAGATAAAATACACAAGGAACAAGATCTCATGAATCTAGCAGGAGCTATATATGCAGCTATTGTATTTCTTGGAGGCTCCAACACTTACTGTGTTCAACCTGTAGTTGCAATAGAAAGAACGGTCTTCTACCGTGAAAGAGCAGCTGGAATGTACTCAGCTCTTCCTTATGCATTTGCTCAGGTAGCAATAGAATTTATTTATGTTGCAACCCAAACATTGGCCTATACTCTTATCCTTTACTCAATGATTGGGTTCCTTTGGCAAGCTGACAAGTTCTTCTGGTTCTACTACTTCATGTGCTTGTCCTTTGTCTGCTTCACACTTTACGGCATGATGACTGTGGCTTTGACTCCAAACCACCAAATTGCTGCAATCGTTATGTCCTTCTTTCTGGTGCTCTGGAACATATTCTCGGGTTTCATTGTCCCTAAATCGCAAATTCCAATATGGTGGAGGTGGTGTTACTGGGCATCTCCAACTGCTTGGACTATATATGGCCTACTGACATCTCAGTTGGGTGACAAAGACAGTCCAATTGAGGTACCTGGATATGGGTCAATATCTGTAAAAGCATACCTTGAGAAACAGATGGGCTATGAATATGACTTCCTTGGAGTTGTTGCTGTAGCTCATATTGCTTTTCTTGCCCTGTTTCTTTTTGTATTTGCATACAGCATCAAGGTTCTTAATTTCCAGAAAAGATAA 4386 0.4118 MDQERLNRDDVVSSLRMSIGSSSSRRSWASASVPEVFERSRSTREDDDEDLKWAAIERLPTFERMRKSIVKQVLESGRFNYEEVDISNLGMQEKKKLLHAILRTVEEDNDKFLCRMRERIDRVGIEIPKVEVRFENLFVEGDAFIGNRALPTLVNSTMNAIERVLGSIKLLPSNKSVVKILQDVSGIVRPARVTLLLGPPGAGKTTLLQALAGKLDRDLRVAGRVTYCGHELSEFVPQRTCAYVSQHNLHHGEMTVRETLDFSGRCLGVGTRHDLLVELTRREKQAGIKPDPEIDAFMKATAMEGQETSLITDYILKILGLEICADALVGDEMRRGISGGEQKRLTTGEMLVGPARVFIMDEISTGLDSSTTFQIVRFLRQLVHMMDVTMIISLLQPAPETFELFDDIILLSEGQIVYQGPRENVLNFFESVGFKCPERKGVADFLQEVTSRKDQEQYWFIRDKPYHYVSVPEFVAQFNNYSIGQKLSEELQVPYGRAKTHPAALVKDKYGISKPELFKACFAREWLLFKRSVLIYVFKTTQIMIMALITMTVFFRTEMKHGQLDDGRKYYGALFFSLINVMFNGMAEVALTILRLPVFFKQRDSLFYPAWAFALPIWIFRIPLSFVESGLWVVLTYYTVGFAPAASRFFRQLLAFFCVHQMALSLFRFIAVLGRTQVVANTLGTFILLLVFVLGGFIIAKDSIEPWMMWGYYASPMMYGQNAIAINEFLDKRWSAPNVDPRIPEPTVGKALLRARSMFTEDYWYWICVGALLGFSLLFNICFIVGLTFLNPFGDSKSIIQEDENEKKGNTRESSVSTAKTFEHADIEMTERNTPDTSIPKAGTATTKRGMMLPFRPLSVAFDHVNYYIDMPTEMKKQGVEESRLQLLRDVSGAFRPGVLTALVGVTGAGKTTLMDVLAGRKTGGYIEGSITISGYPKNQATFARISGYCEQNDIHSPNVTVYESLLFSAWLRLGKEVKRETQKMFVEEVMKLVELHPVRNFIVGLPGINGLSTEQRKRLTIAVELVANPSVIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQIIYGGPLGPQSQKLIEYFEAIPGVPRIKDGYNPATWMLEISSPLIESQLSVDFAELYIKSELHQRNQELIKELSTPPPGTKDLNFPTKYSQSVVTQCKACFWKQQCSYWRNPQYNAIRFFLSICVGAIFGLIFWRKGDKIHKEQDLMNLAGAIYAAIVFLGGSNTYCVQPVVAIERTVFYRERAAGMYSALPYAFAQVAIEFIYVATQTLAYTLILYSMIGFLWQADKFFWFYYFMCLSFVCFTLYGMMTVALTPNHQIAAIVMSFFLVLWNIFSGFIVPKSQIPIWWRWCYWASPTAWTIYGLLTSQLGDKDSPIEVPGYGSISVKAYLEKQMGYEYDFLGVVAVAHIAFLALFLFVFAYSIKVLNFQKR. 1462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06985 1461 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 13 1461 - -
Seca8g06985 1461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 884 1096 IPR027417 -
Seca8g06985 1461 Pfam Plant PDR ABC transporter associated 742 800 IPR013581 -
Seca8g06985 1461 CDD ABCG_PDR_domain2 857 1095 IPR034003 -
Seca8g06985 1461 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 860 1112 IPR003439 GO:0005524
Seca8g06985 1461 Pfam ABC transporter 888 1040 IPR003439 GO:0005524
Seca8g06985 1461 Gene3D - 167 467 IPR027417 -
Seca8g06985 1461 FunFam ABC transporter G family member 40 874 1104 - -
Seca8g06985 1461 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 165 438 IPR003439 GO:0005524
Seca8g06985 1461 Pfam ABC transporter 181 363 IPR003439 GO:0005524
Seca8g06985 1461 Gene3D - 874 1105 IPR027417 -
Seca8g06985 1461 Pfam ABC-transporter N-terminal 94 155 IPR029481 -
Seca8g06985 1461 FunFam ABC transporter G family member 34 168 472 - -
Seca8g06985 1461 SMART AAA_5 897 1089 IPR003593 GO:0016887
Seca8g06985 1461 SMART AAA_5 190 422 IPR003593 GO:0016887
Seca8g06985 1461 Pfam ABC-2 type transporter 1185 1398 IPR013525 GO:0016020|GO:0140359
Seca8g06985 1461 Pfam ABC-2 type transporter 517 729 IPR013525 GO:0016020|GO:0140359
Seca8g06985 1461 MobiDBLite consensus disorder prediction 802 844 - -
Seca8g06985 1461 MobiDBLite consensus disorder prediction 17 41 - -
Seca8g06985 1461 Pfam ABC-2 type transporter 396 449 IPR043926 GO:0140359
Seca8g06985 1461 Pfam ABC-2 type transporter 1069 1141 IPR043926 GO:0140359
Seca8g06985 1461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 438 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06985 Seca-Chr8 165324103 165338122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06985 885 1072 Calmodulin-binding Proteins AT2G36910 27.094 2.06e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06985 K08711 - gmx:100786666 2418.65