Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06978 ATGGCCATTGACCTTTCTTCTCTTTCCTCCTATTACCACCTCATCTTCACTGCCCTGGCCTTCCTCTTTTCATGCCTAATTCTTTTGCTCACACAAAAAACCAAATCCAAAAAGCTCAACCTTCCTCCAGGACCCCCTGGATGGCCTATTGTTGGGAACCTCTTCCAAGTTGCACGTTCTGGCAAGCCTTTTTTTGAGTATGTGAATGAGATGAGAGGAAGATATGGCTCAATCTTCACCCTAAAGATGGGGAAAAGGACAATGATCATCCTCACTGATTCAAAATTAGTGCATGAGTCAATGATCCAGAAAGGTGCACTCTATGCTACAAGGCCTCCAGAGAATCCAACAAGGAACATCTTCAGTGCCAACAAATTCACTGTCAATGCAGCAGTGTATGGCCCTGTTTGGAAGTCACTCAGGAGGAACATGGTTCAAAACATGCTCAGCTCAACAAGGCTCAAGGAGTTTCGTGGTGTTAGAGACAATGCAATGGACAAGCTTATCAACAGGCTTAGAGTTGAAGCAGAGAAAAATAATGGAGTTGTTTGGGTGCTTAAAGATGCAAGGTTTGCTGTGTTTTGTATACTTGTGGCTATGTGTTTTGGTTTTGAAATGGATGAAGAAAAAATGGAGAAAATAGATCAGGTTATGAAGAATGTTCTCATCACATTGGATCCTAGAATTGATGACTATCTCCCAATTCTAAGTCCATTTTTCTCAAAGCAGAGGAAAAGAGCTCTTGAAGTTCGTAAAGAGCAAGTTGAGTTTCTGGTTCCTATTATTGAGAGGAGAAAGAGAGCAATTCAAAATCCAGGATCAGATCACACTGCTACAACGTTTTCTTACCTTGACACACTCTTTGATATCAAAGTTGAAGGGAAAAAATCAGCACCTTCAGATGCTGAATTGGTGACACTATGCTCAGAGTTTCTTAATGGTGGCACAGACACAACCGCAACTGCAGTTGAGTGGGGCATAGCACAACTCATAGCCAACCCTGAGATTCAAACAAAGTTGTTCCAAGAAATTAAAGAAACGGTTGGAGACAAGAAAGTAGATGAAAAGGATGTTGAGAAAATGCCTTACTTACATGCTGTGGTGAAGGAGCTTCTAAGGAAGCATCCTCCAACACACTTTGTACTCACACATGCTGTTACTGAGCCTACTACTTTAGCAGGGTATGACATACCCATGTATGCAAGTGTTGAGGTCTATATTCCAGGTATTAATGAGGATCCCAAATTATGGTCAAACCCAGAGAAATTTGACCCAGAAAGGTTCATTTCTGGAGGTGAGGAAGCTGATATAACTGGTGTCAAAGGTGTGAAAATGATGCCATTTGGAGTGGGAAGGAGGATATGCCCTGGTTTGGCTATGGCCACAGTGCATATTCATCTTATGCTGGCTAGAATGGTGCAGGAGTTTGAATGGAGTGCATATCCACCAGGTAAGAAGTTGGATTTCACTGGGAAATCAGAGTTCACTGTGGTGATGAAAGAGTCTCTAAGAGCAAGCATCAAGCCAAGAGGAGAAACAGCAGAGTTGTAA 1551 0.4223 MAIDLSSLSSYYHLIFTALAFLFSCLILLLTQKTKSKKLNLPPGPPGWPIVGNLFQVARSGKPFFEYVNEMRGRYGSIFTLKMGKRTMIILTDSKLVHESMIQKGALYATRPPENPTRNIFSANKFTVNAAVYGPVWKSLRRNMVQNMLSSTRLKEFRGVRDNAMDKLINRLRVEAEKNNGVVWVLKDARFAVFCILVAMCFGFEMDEEKMEKIDQVMKNVLITLDPRIDDYLPILSPFFSKQRKRALEVRKEQVEFLVPIIERRKRAIQNPGSDHTATTFSYLDTLFDIKVEGKKSAPSDAELVTLCSEFLNGGTDTTATAVEWGIAQLIANPEIQTKLFQEIKETVGDKKVDEKDVEKMPYLHAVVKELLRKHPPTHFVLTHAVTEPTTLAGYDIPMYASVEVYIPGINEDPKLWSNPEKFDPERFISGGEEADITGVKGVKMMPFGVGRRICPGLAMATVHIHLMLARMVQEFEWSAYPPGKKLDFTGKSEFTVVMKESLRASIKPRGETAEL. 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06978 516 CDD CYP77_89 74 504 - -
Seca8g06978 516 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 19 499 - -
Seca8g06978 516 Gene3D Cytochrome P450 33 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06978 516 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06978 516 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06978 516 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06978 516 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06978 516 SUPERFAMILY Cytochrome P450 42 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06978 516 FunFam Cytochrome P450 family protein 35 512 - -
Seca8g06978 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Seca8g06978 516 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06978 516 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06978 516 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06978 516 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06978 516 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06978 516 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06978 516 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06978 516 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06978 516 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06978 516 Pfam Cytochrome P450 42 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06978 Seca-Chr8 165253104 165254654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06978 32 510 Cytochrome P450 AT3G10570 71.190 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06978 K21995 - gmx:100795510 886.33