Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06953 ATGGATTCTGTAAGTAGCATGCTGCTCTTCCTGTTGACTTGCACTATCATACATCATGTTCTTTGTTCATTCCATGCAAGGAGCAAAAAGAAGCTTCCACCAGGTCCTTCCATTCTCACTATCATGAGAAACATTTTTGAATTGTACAACAAGCCACAACAGACACTTGCAAAGCTTGCTGATTTGTATGGCCCAATAATGCGAGTGAAGATAGGCCAAGGAACCACCATAATGATCTCCTCAGCTGACATGGCCAAAGAGATTCTCCAAACCAATGATGCATTGTTATCAGACAGAACAGTTCCTGATAACACAACAACTCACAAGCACAATCAGTTTAGCTTGGTCTTCCTCCCTGTTTCACCTCTCTGGCAGGATCTCAGGAAAATATGCCATCACAATTTATTTTCCAACAAGACTCTTGATGGAAGCCAAGATCTTAGGCGCAAGAAACTGCAAGATCTCCTCAATGACATGCATAAAAGCAGCCTAACCGGTGAAGCAGTTGATATTGGAAGAGCGGCTTTCAAGGCTTGCATTAATTTCTTATCATACACTTTTGTCTCTCAGGATTTTGTTCTGTCTCTTGATGATGAGTATAAGGACATTGTCTCCACTCTCTTGAAAGCAGTTGGAACTCCAAACTTGGCTGATTTTTTCCCAGTGTTGAAGATAGTTGATCCACAAGGGATCAGAAGGCACACATCCAATTACGTTTCAAAGGTGTTCCATGTCTTGGACCATGTGATTGACCAACGCTTGAAGATGAGACAAGAGAAACATTATGTCACAAACAATGACATGTTGGACACCCTGCTTGACATTTCTCAACAGGATAGCCAGAAGATGAATAGAAAACAGATTAAACATCTGTTACTTGATCTACTTGTGGCGGGAACAGACACAACAGCATATGGATTAGAAAGGGCAATGAGTGAACTTGTCCACAACCCAGAGGCTATGTTAAAAGCCAAAAAGGAATTGGAGGAAACAATTGGAAAAGGTAATCCCATTGAGGAATCAGACATTGGTAGGCTTCCATATTTACAAGCAGTGATAAAAGAGAGCTTGCGTATGCACCCACCAGCTCCACTTTTACTCCCTCGAAAAGCAAAGGTAGATGTCGAAATTGGTGGGTTCACAATCCCACAGGGTGCCCAAATTCTAATCAATGAGTGGGCAATTGGGAGGAGCCCAAACACATGGGATAATGCAAATTTATTTTCTCCTGAAAGATTTTTGGGATCTGAAATTGACGTCAAAGGTCGACACTTTAAGCTCACCCCATTTGGCAGTGGGAGACGTATATGCCCTGGCTCACCACTTGCTGTTAGAATGCTGCATTTGATGGTGGGATCACTCATCAACTCTTTTGATTGGAAACTTGAAAACAATTTGGACCCAAAGGCTATGGACTTGGACAAACCCTTGCGGGCAATTCCAGTTATAATAAGCAACTAA 1461 0.4209 MDSVSSMLLFLLTCTIIHHVLCSFHARSKKKLPPGPSILTIMRNIFELYNKPQQTLAKLADLYGPIMRVKIGQGTTIMISSADMAKEILQTNDALLSDRTVPDNTTTHKHNQFSLVFLPVSPLWQDLRKICHHNLFSNKTLDGSQDLRRKKLQDLLNDMHKSSLTGEAVDIGRAAFKACINFLSYTFVSQDFVLSLDDEYKDIVSTLLKAVGTPNLADFFPVLKIVDPQGIRRHTSNYVSKVFHVLDHVIDQRLKMRQEKHYVTNNDMLDTLLDISQQDSQKMNRKQIKHLLLDLLVAGTDTTAYGLERAMSELVHNPEAMLKAKKELEETIGKGNPIEESDIGRLPYLQAVIKESLRMHPPAPLLLPRKAKVDVEIGGFTIPQGAQILINEWAIGRSPNTWDNANLFSPERFLGSEIDVKGRHFKLTPFGSGRRICPGSPLAVRMLHLMVGSLINSFDWKLENNLDPKAMDLDKPLRAIPVIISN. 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06953 486 Pfam Cytochrome P450 33 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06953 486 CDD CYP76-like 60 481 - -
Seca8g06953 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Seca8g06953 486 SUPERFAMILY Cytochrome P450 26 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06953 486 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 475 - -
Seca8g06953 486 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06953 486 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06953 486 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06953 486 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06953 486 FunFam Cytochrome P450 76C4 24 482 - -
Seca8g06953 486 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06953 486 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06953 486 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06953 486 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06953 486 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06953 486 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06953 486 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g06953 486 Gene3D Cytochrome P450 22 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06953 Seca-Chr8 164845372 164846916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06953 1 482 Cytochrome P450 AT2G45550 41.980 4.48e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06953 - - gmx:100800810 697.582