Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06924 ATGGGAAGCTCCAGAGATAATGCCATGGGACCAGTAGCTGTGGTGTCTCTCTTGCTTGGGACCATGCTTACTAATGAGATTAGTAACTACAAAAGTCATGAATATCTACGTCTTGCATTTACTGCCACCTTCTTTGCAGGAATCACTCAGATGGCACTTGGAGTTTTTAGGTTGGGTTTCTTGATTGACTTCCTATCTCATGCTGCCATTCTGGGATTTATGGGTGGAGCTGCTATTACTATTGCATTGCAACAACTTAAAGGTTTGCTTGGCATAAAAGATTTCACTAAAAAAACTGACATTGTTTCTGTCATGTGCTCAGTTTGGAATTCAGTGCACCATGGGTGGAATTGGGAGACAATAGCCATTGGAGTAGCATTCTTGGTCTTCCTTCTTATAGCCAAGTATATTGCTAAAAAGAATAAGAAACTCTTTTGGGTGGCTGCAATTGCTCCTATGATCTCTATTATAGTGTCTACATTTTTTGTGTATATTACCAGGGCAGACAAGAAAGGTGTATCAATTGTGAAAAATGTAAAAAAGGGTGTGAATCCAATATCTGTTAGTGAAATTTATTTTAGTGGAAAATATCTTGGTGCTGGTATTCGAATTGGTGTGGTAGCTGGTATGATAGCACTCACAGAATCTATAGCAATTGGGAGAATATTTGCTGCAAAGAAAGACTATTCATTGGACGGCAATAAAGAAATGGTGGCAATGGGAACAATGAATGTTATTGGTTCCCTGACATCATGTTATGTGGCAACAGGAGGTTTTGGTCGGTCAGCAGTGAATGATATGGCTGGGTGTAAAACCGCTGCATCAAACATTGTTATGTCAATTATTGTATTATTAACTATGATACTCATTACACCACTATTTAAGTACACTCCAAATGCAGTGCTTGCTTCAATTATTATAGCTGCTGTGATGAGCCTTGTGGACATTAAGGCAATTGTTCTTTTGTGGAAGATTGACAAATTCGATTTTCTAGCTTGCATGGGAGCCTTTTTTGGTGTGATATTCAAAAGTGTTGAGATTGGCCTTCTAATTGCGGTGGCAATATCTTTTGCCAAAATCCTTTTACAAGTGACAAGGCCAAGGACTGCAGTACTTGGGAAGCTTCCAGGGACTGCTGTTTATAGAAACATCCAACAATATCCCAAAGCAACTCAGATTCCTGGCATGCTGATTATTAGAGTTGACTCTGCAATATACTTCTCAAACTCCAACTATATCAAGGACAGAGTTTTGAAATGGCTGACTGATGAAGAGGTCCAAAGGACAACAAGTGAATTTCCCAAAATACAGTATCTCATTGTTGAAATGTCACCTGTTACTGATATAGACACTAGTGGCATCCATGCATTTGAAGATTTATTAAAGAGCCTTCATAAAAGAGAAGTCCAGCTTCTCCTGGCAAACCCAGGGCCAATTGTAACAGAGAAGCTCAACACATCCAAGTTATCGAGCTTGATTGGGGAAGGTAATATTTTTCTCTCGGTGGCTGATGCTGTTGCAACTTTTGGTGTAAAGGGTGGAGAAGTGTGA 1551 0.3952 MGSSRDNAMGPVAVVSLLLGTMLTNEISNYKSHEYLRLAFTATFFAGITQMALGVFRLGFLIDFLSHAAILGFMGGAAITIALQQLKGLLGIKDFTKKTDIVSVMCSVWNSVHHGWNWETIAIGVAFLVFLLIAKYIAKKNKKLFWVAAIAPMISIIVSTFFVYITRADKKGVSIVKNVKKGVNPISVSEIYFSGKYLGAGIRIGVVAGMIALTESIAIGRIFAAKKDYSLDGNKEMVAMGTMNVIGSLTSCYVATGGFGRSAVNDMAGCKTAASNIVMSIIVLLTMILITPLFKYTPNAVLASIIIAAVMSLVDIKAIVLLWKIDKFDFLACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTAVYRNIQQYPKATQIPGMLIIRVDSAIYFSNSNYIKDRVLKWLTDEEVQRTTSEFPKIQYLIVEMSPVTDIDTSGIHAFEDLLKSLHKREVQLLLANPGPIVTEKLNTSKLSSLIGEGNIFLSVADAVATFGVKGGEV. 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06924 516 Pfam STAS domain 387 505 IPR002645 -
Seca8g06924 516 Pfam Sulfate permease family 1 334 IPR011547 GO:0016020
Seca8g06924 516 ProSiteProfiles STAS domain profile. 386 509 IPR002645 -
Seca8g06924 516 FunFam Sulfate transporter 31 366 512 - -
Seca8g06924 516 SUPERFAMILY SpoIIaa-like 388 509 IPR036513 -
Seca8g06924 516 CDD STAS_SulP_like_sulfate_transporter 387 502 - -
Seca8g06924 516 Gene3D STAS domain 366 511 IPR036513 -
Seca8g06924 516 PANTHER SULFATE TRANSPORTER 1 507 IPR001902 GO:0016020|GO:0055085
Seca8g06924 516 NCBIfam sulfate permease 1 505 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06924 Seca-Chr8 164403909 164414441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06924 1 512 Inorganic Solute Cotransporters AT1G22150 71.735 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06924 K17470 - gmx:100784124 842.032