Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06907 ATGAAGAAAACCCTCGTTTACCACATAGGTCGAGCTCCACACGGCGATCGCACTAATTGGGTCATGCATGAATATAGGATGGTCGATGAGCAATTGGCCCAGGCTGGAGTATTGCAGGATGCTTATGTGCTGTGTAGGATATTCGAGAAGAGTGGTCAAGGACCCAAGAACGGGGAGAAGTATGGGGCCCCTTTCATAGAAGAGGAATGGGATGATGATGCTGTGGTAGATGCCGTGCCTGTGCCCGTTCAGTCCGTGCCGGCTGTTGATGATGAGGATTTGAAGGAGGTGTCTACTATTGGTGCTTATATTGAAAATAAGGACCTTGACAAGAACCTTGATGATGCAAATGTTACAATTGGAACTGCTGGTTTTTCATCAAACTTCCATTATGGAGAGTGTAGTGGCCATCCTCAGCATTCTGATCAGAAGCCATTGGTGGACACTTTTGGAATTTATGGGCCTCAAAATGACCAGCCTTTTAATATGGCTGAGCAATATGATATGGACACCAATGCAGTGAAAGATGGAGACACTGTTGAGCTGAACCATGATGGAAATTCTCTGAATCTCAGTTATCCTTTTGATGATCTGGATGTGTACTTTGATGCCACTGGTTATCCTCTGAGTTTTGATGATGGATCATTCCTGGAAACCAATGATCTTGTGAATCTGGGTGAGGGTAATCCTACTGAGGCAGATCCTTCTGGTACTGATATGCTAGATGAGTATCTTGCATGCAGTGATGACGATATTCTCAAGTATATATCTTTTGATTCTCCTCAGAATACAGAGAGTCAAAGCCCTGTTATTGACCAAGGACCTGCTTCTGTTGAGAAGAGTGTGGAGGGAGATATTACCCTGGCGAGCAAACATGTTTCTGATGAAGCACAATCCAGCAATGAAGCTTCTTCAAAACATAATCCACAGGCATCCAAGATGGTATCAGGAGAGACAAATCCATTTGTAAAGCAGGCCAATAAATTGTTGGCCAGCATACCTGCTCCACCAGCATTTGCTTCAGAGTTTCCTTCTAAGGAGTTTGCTCTTGGGCTTCATCCTGCTGCTCAGTCTTCCAATTCAGCTCATGTAACTGCAGGTATGATCAGCATAACAGACATTACTTTAAGAGGCGATGCGATGGATTGGATGGTGGGCAAGAATGGAGGGTTTAATAATCCCCTTATGTCTACTCGGTTTTCTCAACCTGGTGTTAACTCTGCTGCTTTGATGCCTATTTGTGGCTTGGTCTCTAGCAAGACTGCATTTGTGTTGTCGCATGGCTGGATTTTCTTGATGAGTTTTTCGGTTCTGATTCTCTCATTGAGTTTCAAGATTGGATGCATCATGTATAGTGGTAAATGA 1365 0.4396 MKKTLVYHIGRAPHGDRTNWVMHEYRMVDEQLAQAGVLQDAYVLCRIFEKSGQGPKNGEKYGAPFIEEEWDDDAVVDAVPVPVQSVPAVDDEDLKEVSTIGAYIENKDLDKNLDDANVTIGTAGFSSNFHYGECSGHPQHSDQKPLVDTFGIYGPQNDQPFNMAEQYDMDTNAVKDGDTVELNHDGNSLNLSYPFDDLDVYFDATGYPLSFDDGSFLETNDLVNLGEGNPTEADPSGTDMLDEYLACSDDDILKYISFDSPQNTESQSPVIDQGPASVEKSVEGDITLASKHVSDEAQSSNEASSKHNPQASKMVSGETNPFVKQANKLLASIPAPPAFASEFPSKEFALGLHPAAQSSNSAHVTAGMISITDITLRGDAMDWMVGKNGGFNNPLMSTRFSQPGVNSAALMPICGLVSSKTAFVLSHGWIFLMSFSVLILSLSFKIGCIMYSGK. 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06907 454 MobiDBLite consensus disorder prediction 293 316 - -
Seca8g06907 454 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 231 - -
Seca8g06907 454 MobiDBLite consensus disorder prediction 260 280 - -
Seca8g06907 454 MobiDBLite consensus disorder prediction 260 274 - -
Seca8g06907 454 Gene3D NAC domain 1 54 IPR036093 GO:0003677|GO:0006355
Seca8g06907 454 SUPERFAMILY NAC domain 1 50 IPR036093 GO:0003677|GO:0006355
Seca8g06907 454 ProSiteProfiles NAC domain profile. 1 50 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06907 Seca-Chr8 164223399 164226644 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06907 1 446 NAC Transcription Factor Family AT5G04410 33.267 2.18e-59 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06907 - - aprc:113871167 509.99