Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06881 ATGGGAATGGCAGTGGGAGATGATGATTTGCTCAGTGAAAAAGCAGCCATGATGAGAGAGTCTCTGCAGAAGAGCCAGACCATCACGGACAACGTTGTCACCATTCTTGGTTCCTTTGACCACCGTCTCTCTGCCCTTGAAACCGCCATGCGTCCTACTCAGATTAGAACTCATTCTATTAGGAAAGCTCATGAAAATATTGACAAGACTTTGAAGGCTGCAGAGGTTATATTGGCTCACTTTGATCAATATCGCCAGGCAGAGGCAAAAATACTTAAAGGGCCACATGAAGACCTGGAAAACTATCTTGAAGCAATTGATAAGTTGAGAAGCAACATTCAATTTTTTAGTAGTAAGAAGAGTTTTAAGAGTACTGATGGCGTCGTTGGCCATGCTAATAATTTGCTAGCTAAAGCTATTTCTAAACTAGAGGATGAGTTTAAGCAGCTATTATCATCTTACAGCAAACCCGTGGAGCCTGAGCGCCTCTTTGATTGCCTTCCAAACTCTATGCGACCTTCGTCAGGATCACCTGGCCATGAGGGTGATCACAGTGGCAAGAATCCTGCTCATCACCATTCCGAGTCTCAGAACAATAATGCTGACGCTGTTGTGTACACACCTCCTGCTCTTATACCACCAAGAATTTTGCCCCTGCTACATGATTTAGCTCAGCAAATGATTGAAGCTGGTCACCGGCAACAGTTACTCAAAATATACAGAGATGCTCGTTCAACTGTATTGGAAGAAAGCCTCCAAAAACTTGGAGTTGAGAAACTCAACAAAGATGATGTTCAAAAGCTACAGTGGGAGATTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATAGCAGTGAAATTGTTGTTTGCTGGTGAGAGGAAAGTTTGTGACCAGATATTTGAAGGTTTCGATTCACTCAGTGAACAGTGTTTTGCTGAGGTGACTACAAACAGTGTCTCTATGCTACTTAGCTTTGGAGAAGCAATAGCGAAAAGCAAGAGATCCCCAGAAAAGTTATTTGTACTTTTAGACATGTATGAAATAATGCAAGAGCTCCATTCAGAGATTGAGACACTTTTTAAAGGCAAAGCTTGCACTGAAATAAGAGAAGCTGCAATGAGTTTGACAAAACGACTTGCACAAACAGCTCAGGAGACCTTTGGAGATTTTGAAGAAGCAGTTGAGAAAGATGCTACAAAGACTGCAGTAACAGATGGAACTGTCCATCCTTTGACGAGCTACGTTATTAACTATGTGAAGTTTTTATTTGACTACCGGTCCACCTTGAAGCAACTTTTCCAAGAATTTGAAGGTGGAGATGATTCTTCCCAGCTAGCATCTGTAACAATGCGAATAATGCAAGCTTTGCAAACCAATCTAGATGGTAAATCAAAGCAGTATAGAGACCAGGCATTGACACACCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCGGTTCGGAGATCTGAAGCCAAGGATTTGCTTGGGGATGATTGGGTACAACGACATAGGAGGATTGTGCAGCAGCATGCCAATCAATACAAAAGGAATGCTTGGGCAAAGATTCTTCAGTGCCTATCTATTCAGGGCCTTACCTCATCAGGTGGTGGGAGTAGTACTGCTGGTGGTGATGGTGGAACTGGAAGTAGTAGTGGTGCTTCAAGAGCAATTGTTAAAGACAGGTTTAAGTCATTCAATGTTATGTTTGAGGAACTCCATCAGAAACAATCTCAATGGACAGTTCCTGACAGCGAGTTGCGAGAGTCTCTCAGGCTTGCAGTTGCTGAAGTCTTGTTGCCTGCTTACAGATCATTTGTGAAACGTTTTGGGCCTCTAGTGGAGAGTGGAAAGACTCCTCAGAAGTACATCAAATACACAGCAGAAGATCTAGATCGGATGTTGGGTGAATTTTTTGAAGGAAAAAACATGAGTGAAACTAAGCGGTAA 1962 0.421 MGMAVGDDDLLSEKAAMMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAEVILAHFDQYRQAEAKILKGPHEDLENYLEAIDKLRSNIQFFSSKKSFKSTDGVVGHANNLLAKAISKLEDEFKQLLSSYSKPVEPERLFDCLPNSMRPSSGSPGHEGDHSGKNPAHHHSESQNNNADAVVYTPPALIPPRILPLLHDLAQQMIEAGHRQQLLKIYRDARSTVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSEQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGKACTEIREAAMSLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEGGDDSSQLASVTMRIMQALQTNLDGKSKQYRDQALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSSTAGGDGGTGSSSGASRAIVKDRFKSFNVMFEELHQKQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKTPQKYIKYTAEDLDRMLGEFFEGKNMSETKR. 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06881 653 Pfam Exo70 exocyst complex subunit 279 640 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca8g06881 653 Coils Coil 99 119 - -
Seca8g06881 653 Gene3D Exocyst complex component Exo70 75 653 - -
Seca8g06881 653 PANTHER EXOCYST COMPLEX PROTEIN EXO70 58 645 IPR004140 GO:0000145|GO:0006887
Seca8g06881 653 SUPERFAMILY Cullin repeat-like 77 644 IPR016159 -
Seca8g06881 653 MobiDBLite consensus disorder prediction 164 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06881 Seca-Chr8 163964403 163976540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06881 9 653 EXO70 exocyst subunit family AT5G03540 75.298 0.0 1002
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06881 K07195 - gmx:100813987 1157.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g06881 8 163964403 163976540 Seca8g06881 8 163964403 163976540 ECH