Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06869 ATGAGTTACACATCTAAACAGTTGAGCCAGAGCAGCAGGGTTCTTGCAAACAAGCCAATGAAGGAGGTTACTGTGCAAGGAGAATTCTTCAAAATTGAAGGAAACACAACTTTCGTGATGAACTATGCACGTTGGTCAGAAGAACATTACAAGCTCGTTTCTGAGATAAAGAGTGCTTTAAATGATCATGATCATATTATTCACGATGACAGGTTACAGATACTTGTAAACATAATTATGAAGCACTACTCTGAACTCTTCCAGATGAAAACAAGTGCTGCTGCAAATGTAGATGCCTTCAATGTTGGTTCTGCTATTTGGTGCAGAACAGCTGAACCCCATTTTTGGTGGATTGGAGGCTTTCGCCCTTCTGAACTTCTTCAGGTTATTCTGCCTCAACTTCAACATTTGTGCACCCAGCAACAACTTTCTGATATTTTTAATTTGGGACAATCATGTCAACAAGCAGAAGAAGCTCTTGCACAAGGCATGGAAAAACTCCAGCAGATCCTTGATAAAGCGACAGCAGCAGGTGACAAAAGATTTCAACTGGCGTATGTCCCTCAACAAATGAGCTTCTTAAAGCAGGTAATTGCATGCATTCTTTAA 609 0.4039 MSYTSKQLSQSSRVLANKPMKEVTVQGEFFKIEGNTTFVMNYARWSEEHYKLVSEIKSALNDHDHIIHDDRLQILVNIIMKHYSELFQMKTSAAANVDAFNVGSAIWCRTAEPHFWWIGGFRPSELLQVILPQLQHLCTQQQLSDIFNLGQSCQQAEEALAQGMEKLQQILDKATAAGDKRFQLAYVPQQMSFLKQVIACIL. 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06869 202 ProSiteProfiles DOG1 domain profile. 35 202 IPR025422 GO:0006351|GO:0043565
Seca8g06869 202 Pfam Seed dormancy control 53 131 IPR025422 GO:0006351|GO:0043565
Seca8g06869 202 Coils Coil 153 173 - -
Seca8g06869 202 PANTHER TRANSCRIPTION FACTOR TGA9 35 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06869 Seca-Chr8 163833298 163835975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06869 34 201 Calmodulin-binding Proteins AT5G10030 47.619 5.34e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06869 K14431 - gmx:100527435 265.388