Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06834 ATGGCAGAGGTGAAGATACATGGATTTTGGTATAGTCCTTTTACTTTGAGGGTTGTATGGACCCTAAAGCTAAAGGATATACCATATGAGAACATAGAGGAAGACCGTTTCAACAAAAGTCCCCAGCTTCTTGAATACAACCCAGTGCACAAGAAGACTCCAGTGCTTGTTCATAATGGAAAACCAATATGTGAATCAATGATCATTGTTGAATACATTGATGAGATATGGCCACACAATCCATTACTTCCTGTTGATCCCTATGAGAGAGCTTTGGCACGGTTTTGGGTTAAATATGTGGATGACATGTTTTCTACAGTTGCTGCTTTCATTCGTAGCAATGTTGGTGAAGGGCGAGAAAATGCCATAAGAGATATATGGGAAAGACTCAGAGTTATTGAGGATCAGTGTTTAGGTGATCACAATAAATTTTTTGGGGGAGAAACTATCAACATTGTAGACATAGCTCTTGGGTCTTTTGCCAAGTTTATTGAGGTTCTGGAAGATAATTTTGAAGTGAAGGTCATAGAAGCTGAGAAATTTCCTCACTTGCATTCATGGTTTAATAATTTCAAGGAGGTTCCTGTCATCTCTGAAAACACCCCTGACCAGGAGAAATTGGTAGCTTTTATTAAGTCTCTTAGAGAAAAAATGGCACAAGAGAAATTATATGCATTTTGGTATAGCCCTTTTACTTTGAGGGTTGTATGGACCCTAAAGCTAAAGGGCATAGTATATGAGAACATAGAGGAAGACCGCTTCAACAAGAGTCCTCAACTTCTTGAATACAACCCAGTGCACAAGACTCCGGTGCTTGTTCATGTTGGAAAACCCATATGTGAGTCAATGGTCATTGTTGAATACATTGATGAGATATGGCCACACAACCCATTGCTTCCTGTTGATCCCTATGAGAGAGCTCTGGCACGGTTCTGGGTTAAATACGTCGATGACATGATTTCTACAGTTGCACCACTCTTTCGTAATAGTAGTTGTGAAGAGCGAGAGAAGGCCATAAGAGATATATGGGAACGACTCAAAGTTGTTGAGGATCAGTACTTAGGTGATCAGAAGCAATTCTTTGGGGGAGACACTCTAAACATTGTAGACATAGCTCTTGGGTCTATTGCCAAACTTCTTGAGGCTAAGGAAGATATATTTAAAGTGAAGATCCCAAAAGCTGAGAGACTCCCTCGTTTGCATTCATGGTTTAAAACTTTCAAGGACGTTCCAGTCATAAGAGAAAACGCCCCTGACCAAGAGAAAATGACAGCTTTTATTAAGTCTCTCAGAGAAAAAAATTTTAGGATTGTCTTCCTAAGAAAATTATATATAGCTTTGAAGAAATTATTTACGTACAAAGCTTTTGTATCTCTTTGGTCATCTTGA 1389 0.3909 MAEVKIHGFWYSPFTLRVVWTLKLKDIPYENIEEDRFNKSPQLLEYNPVHKKTPVLVHNGKPICESMIIVEYIDEIWPHNPLLPVDPYERALARFWVKYVDDMFSTVAAFIRSNVGEGRENAIRDIWERLRVIEDQCLGDHNKFFGGETINIVDIALGSFAKFIEVLEDNFEVKVIEAEKFPHLHSWFNNFKEVPVISENTPDQEKLVAFIKSLREKMAQEKLYAFWYSPFTLRVVWTLKLKGIVYENIEEDRFNKSPQLLEYNPVHKTPVLVHVGKPICESMVIVEYIDEIWPHNPLLPVDPYERALARFWVKYVDDMISTVAPLFRNSSCEEREKAIRDIWERLKVVEDQYLGDQKQFFGGDTLNIVDIALGSIAKLLEAKEDIFKVKIPKAERLPRLHSWFKTFKDVPVIRENAPDQEKMTAFIKSLREKNFRIVFLRKLYIALKKLFTYKAFVSLWSS. 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06834 462 CDD GST_C_Tau 303 428 IPR045074 GO:0004364|GO:0006749
Seca8g06834 462 Gene3D Glutaredoxin 1 85 - -
Seca8g06834 462 Gene3D Glutaredoxin 219 301 - -
Seca8g06834 462 SUPERFAMILY GST C-terminal domain-like 291 433 IPR036282 -
Seca8g06834 462 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Seca8g06834 462 CDD GST_N_Tau 222 293 - -
Seca8g06834 462 CDD GST_N_Tau 4 77 - -
Seca8g06834 462 SUPERFAMILY GST C-terminal domain-like 75 217 IPR036282 -
Seca8g06834 462 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 302 426 IPR010987 -
Seca8g06834 462 FunFam Tau class glutathione S-transferase 83 221 - -
Seca8g06834 462 SFLD Glutathione Transferase (cytosolic) 217 433 IPR040079 -
Seca8g06834 462 SFLD Glutathione Transferase (cytosolic) 1 221 IPR040079 -
Seca8g06834 462 SFLD Main.3: Omega- and Tau-like 217 433 IPR045073 -
Seca8g06834 462 SFLD Main.3: Omega- and Tau-like 1 221 IPR045073 -
Seca8g06834 462 Pfam Glutathione S-transferase, N-terminal domain 222 291 IPR004045 -
Seca8g06834 462 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
Seca8g06834 462 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Seca8g06834 462 Gene3D - 86 218 - -
Seca8g06834 462 Gene3D - 302 437 - -
Seca8g06834 462 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 219 297 IPR004045 -
Seca8g06834 462 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 208 IPR045073 -
Seca8g06834 462 Pfam Glutathione S-transferase, C-terminal domain 130 192 IPR004046 -
Seca8g06834 462 FunFam Glutathione S-transferase GSTU6 1 83 - -
Seca8g06834 462 FunFam Tau class glutathione S-transferase 299 436 - -
Seca8g06834 462 CDD GST_C_Tau 87 212 IPR045074 GO:0004364|GO:0006749
Seca8g06834 462 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 210 IPR010987 -
Seca8g06834 462 SUPERFAMILY Thioredoxin-like 222 319 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06834 Seca-Chr8 163379723 163393261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06834 214 433 Glutathione S-transferase Gene Family AT2G29460 42.152 4.98e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06834 K00799 - tpra:123914566 358.992