Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g06789 ATGGTTGATACCAGGCATTCTACTGATCGAGAAGTTGCTCTTATGATCCTGTTGGCTTACTTTTCTTACATATTTGCTGAAATTATCGATTTAAGTGGGATCCTTACCGTGTTCTTCTGTGGGATTCTCATGTCCCATTACACCTGGCATAATACCGCAAAAAATTCTAGAATCACAAGTAGGCATACTTTTGCAACAATTTCTTTTATCGTCGAGAGTTTCATCTTCTTGTATGTTGGTGTGCATGCATTGGATACAGACAACATGATATTTGTCAGCAACAGTTCATCAACATTACTTGGGACATCTGCAATACTGCTTTGCTTGGTTCTGCTTGGAAGGGCAGCTTTTGTGTTCCCCCTGTCATTTATTGCCAATTCTTTCCGAAAGTCTGAGAATGACAAGATTGGTTTTAAGCAGCAGTTTGTAATATGGTGGGCTGGGATTATGCGAGGTGCTGTATCCATTGCACTTGTATTTAAGAAGTTTACTATGTCAGGACATTCTCGACTGGAAGGGGATGCTATCATGATCACCAGCACCATAACAGTGGTTCTCTTAACTAATGTGGTGGGTGGATTACTGACCAAGCCTCTAATAAGGTTGTTGTTGGATTCCCATAGGCATGTAGGTAGCTCAATGTCATCTGGGTTGTTTACTACCAGGAATCTGCCTCTACTCTCCAATGGACAACATTCAGATCAATCTAATAGAGACACCGGCAACCCCCTTGACTCGAATCAAACTGTCCATCATTATTGGCGAATGTTTGATGATACTTTCATGCGCCCTGTTTTTGGTGGCAGGGGATTTGCACAACCTGTTAGTCCTGATTCACCAAGAGACAGTGAGGGCACTAGCAAAAGCGAAAATTAA 876 0.4189 MVDTRHSTDREVALMILLAYFSYIFAEIIDLSGILTVFFCGILMSHYTWHNTAKNSRITSRHTFATISFIVESFIFLYVGVHALDTDNMIFVSNSSSTLLGTSAILLCLVLLGRAAFVFPLSFIANSFRKSENDKIGFKQQFVIWWAGIMRGAVSIALVFKKFTMSGHSRLEGDAIMITSTITVVLLTNVVGGLLTKPLIRLLLDSHRHVGSSMSSGLFTTRNLPLLSNGQHSDQSNRDTGNPLDSNQTVHHYWRMFDDTFMRPVFGGRGFAQPVSPDSPRDSEGTSKSEN. 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g06789 291 Pfam Sodium/hydrogen exchanger family 6 200 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca8g06789 291 MobiDBLite consensus disorder prediction 268 291 - -
Seca8g06789 291 PANTHER SODIUM/HYDROGEN EXCHANGER 5 266 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g06789 Seca-Chr8 162851725 162854976 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g06789 5 288 Antiporters AT3G05030 57.143 2.21e-109 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g06789 - - zju:107426063 325.094